Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_N16
         (845 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130446-1|AAI30447.1|  262|Homo sapiens chromosome 20 open read...    64   6e-10
AL117382-3|CAI23111.1|  262|Homo sapiens chromosome 20 open read...    64   6e-10
BC139911-1|AAI39912.1|  292|Homo sapiens similar to CG10671-like...    50   1e-05
AB062486-1|BAB93511.1|   86|Homo sapiens OK/SW-CL.33 protein.          31   6.9  

>BC130446-1|AAI30447.1|  262|Homo sapiens chromosome 20 open reading
           frame 142 protein.
          Length = 262

 Score = 64.1 bits (149), Expect = 6e-10
 Identities = 29/79 (36%), Positives = 45/79 (56%)
 Frame = +1

Query: 541 PKSYFSRSDNFFNQYFVKIGWFWTLVITVPYVLLTSYTTCCGKRRMIATAHMVRLLIATV 720
           P+SY S   N  N YFVK+ W WT  + +P++ LT+Y    GK  ++    +  LL+ T 
Sbjct: 45  PESYLSNKRNVLNVYFVKVAWAWTFCLLLPFIALTNY-HLTGKAGLV-LRRLSTLLVGTA 102

Query: 721 FWWGWTTLFNVIENNYGRC 777
            W+  T++F+ IE+  G C
Sbjct: 103 IWYICTSIFSNIEHYTGSC 121


>AL117382-3|CAI23111.1|  262|Homo sapiens chromosome 20 open reading
           frame 142 protein.
          Length = 262

 Score = 64.1 bits (149), Expect = 6e-10
 Identities = 29/79 (36%), Positives = 45/79 (56%)
 Frame = +1

Query: 541 PKSYFSRSDNFFNQYFVKIGWFWTLVITVPYVLLTSYTTCCGKRRMIATAHMVRLLIATV 720
           P+SY S   N  N YFVK+ W WT  + +P++ LT+Y    GK  ++    +  LL+ T 
Sbjct: 45  PESYLSNKRNVLNVYFVKVAWAWTFCLLLPFIALTNY-HLTGKAGLV-LRRLSTLLVGTA 102

Query: 721 FWWGWTTLFNVIENNYGRC 777
            W+  T++F+ IE+  G C
Sbjct: 103 IWYICTSIFSNIEHYTGSC 121


>BC139911-1|AAI39912.1|  292|Homo sapiens similar to CG10671-like
           protein.
          Length = 292

 Score = 50.0 bits (114), Expect = 1e-05
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +1

Query: 541 PKSYFSRSDNFFNQYFVKIGWFWTLVITVPYVLLTSYTTCCGKRRMIATA-HMVRLLIAT 717
           P++ F+   NFFN  FV   W WT      +VLL  +      RR+  TA H+ RL++  
Sbjct: 76  PRTIFASHGNFFNIKFVNSAWGWTCTFLGGFVLLVVF---LATRRVAVTARHLSRLVVGA 132

Query: 718 VFWWGWTTLFNVIENNYGRC 777
             W G    F +IE+  G C
Sbjct: 133 AVWRGAGRAFLLIEDLTGSC 152


>AB062486-1|BAB93511.1|   86|Homo sapiens OK/SW-CL.33 protein.
          Length = 86

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -3

Query: 351 PCNSYVCF*NLFG--LSCFLLKIYVIFTLFVSYISIKLFHCYTHTLVGY 211
           P N   C  NL    +SC++ K+      F+SY S KL  C   T VGY
Sbjct: 12  PINLCYCSSNLMHTVISCYICKVG---NCFLSYRSFKLHFCAVETKVGY 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,997,181
Number of Sequences: 237096
Number of extensions: 2096525
Number of successful extensions: 6535
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6532
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)