Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_N15
         (931 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   1.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   5.2  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    22   6.9  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    22   6.9  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    22   6.9  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    22   6.9  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    22   6.9  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   6.9  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    22   6.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.9  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   6.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   6.9  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    22   6.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   6.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   9.1  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 425  PPPPXPPPXS 396
            PPPP PPP S
Sbjct: 1355 PPPPPPPPSS 1364


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 679 PPXXTXPPPPP 711
           PP    PPPPP
Sbjct: 338 PPKPAPPPPPP 348


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 519  GXXXPPPPPP 490
            G   PPPPPP
Sbjct: 1855 GSPEPPPPPP 1864


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 375 PFPPRFIPPDMYRLRPPP 392


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 360 PFPPRFIPPDMYRLRPPP 377


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 873 PXPPPXXPPXGXKKXPPP 926
           P PP   PP   +  PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +3

Query: 870 PPXPPPXXPPXGXKKXPP 923
           PP P    PP G    PP
Sbjct: 39  PPNPSQGPPPGGPPGAPP 56



 Score = 21.8 bits (44), Expect = 9.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 867 PPPXPPPXXPP 899
           PPP  PP  PP
Sbjct: 46  PPPGGPPGAPP 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.308    0.146    0.502 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,725
Number of Sequences: 438
Number of extensions: 6987
Number of successful extensions: 23
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)