Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_N13
         (866 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   4.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   8.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   8.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   8.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   8.4  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   8.4  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 595  LPGKQTSPIAVVPAPAYIILLINPPLSPN 509
            +PG       VV +P  + +   PPL PN
Sbjct: 1213 VPGSPADIKVVVSSPQALFISWLPPLEPN 1241


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 595  LPGKQTSPIAVVPAPAYIILLINPPLSPN 509
            +PG       VV +P  + +   PPL PN
Sbjct: 1209 VPGSPADIKVVVSSPQALFISWLPPLEPN 1237


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 156 RPPLSTRNQMVPRSLHPCGYRNYHYMKLHMPIMLSILKPKPM 281
           RP   T       S H C  +N  Y K+ MP +L+ +   P+
Sbjct: 8   RPSYCTWELNATNSPHTCRTKNGDYTKI-MPDILTAIGQTPL 48


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 179 SNGPAKPPPMRVSELPLYETPHADYAEYLEAK 274
           SNG   P   R S LP Y+  + +    LE +
Sbjct: 304 SNGVTFPQRNRFSSLPYYKYKYLNVINALEMR 335


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 432 FKYLREEENKEVRYGA 479
           +KY+RE  NKE R  A
Sbjct: 321 YKYIREIMNKESRISA 336


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 432 FKYLREEENKEVRYGA 479
           +KY+RE  NKE R  A
Sbjct: 321 YKYIREIMNKESRISA 336


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 179 SNGPAKPPPMRVSELPLYETPHADYAEYLEAK 274
           SNG   P   R S LP Y+  + +    LE +
Sbjct: 304 SNGVTFPQRNRFSSLPYYKYKYLNVINALEMR 335


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 566 CGTRTSIYYSPNKSTPESKYEACET 492
           CGTR S       +T  S   AC+T
Sbjct: 22  CGTRPSFVSDEMIATAASVVNACQT 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,433
Number of Sequences: 438
Number of extensions: 6004
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)