Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_M22
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p...    29   3.4  
AF067211-14|AAC16992.2|  412|Caenorhabditis elegans Hypothetical...    29   4.4  
Z78063-4|CAB01505.1|  685|Caenorhabditis elegans Hypothetical pr...    29   5.9  
U50829-1|AAC47113.1|  685|Caenorhabditis elegans SEL-1 protein.        29   5.9  
U50828-1|AAC47112.1|  685|Caenorhabditis elegans sel-1 protein.        29   5.9  
Z81487-6|CAB03996.2|  872|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical protein
            K01A6.2 protein.
          Length = 1092

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
 Frame = +3

Query: 618  NDLGQVLNSIENQLGLAAIENGHYED--GLNLLRSAANRDHAPALYNLGLCYEMGLGVSV 791
            N  G VL  +   LG     NGHYE   GL     +    H P  Y   L ++   G+S+
Sbjct: 943  NTAGPVLPMVSATLGRNFTMNGHYESNYGLPPPPPSVYEKHPPPSY---LAFD---GLSI 996

Query: 792  NEKMAMELYXSAATLHHPXALYNLGIYYGQ 881
            N++M+M       TL      +   I  GQ
Sbjct: 997  NDRMSMNGNLIDVTLERGTKGFGFSIRGGQ 1026


>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
           protein F26D2.10 protein.
          Length = 1213

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 21/72 (29%), Positives = 35/72 (48%)
 Frame = +3

Query: 243 SSYKCLSSCRNDGTNSKRWNFEHRTWIDAITWSSGLIIGWYTSQLIHIKYKYHSNQYQKK 422
           +SY+ LS+ ++    +       +T  + IT S G I+G   S L  ++     +QY K 
Sbjct: 511 NSYEFLSTIKSIAKIASELQVVQKT-AENITVSDGNILGDLISNLSLVETSKCFSQYYKT 569

Query: 423 CPTLSHIVNSLR 458
            PTL   V+ L+
Sbjct: 570 MPTLESTVSKLK 581


>AF067211-14|AAC16992.2|  412|Caenorhabditis elegans Hypothetical
           protein B0205.6 protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = -2

Query: 244 ENQRDGVHRLFSSDELELLTTPTVLRFSNWATLLSKVSRIRRET-YFHMITFKLIFTCIL 68
           E  R+ V  L  +D  +++ T      +N A  +  V++ R+++   H+IT +    C+L
Sbjct: 58  EQAREHVANLIKADPRDIIFTSGATESNNLA--IKGVAKFRKQSGKNHIITLQTEHKCVL 115

Query: 67  NQYVYTFNQILRIPY 23
           +   Y  N+  ++ Y
Sbjct: 116 DSCRYLENEGFKVTY 130


>Z78063-4|CAB01505.1|  685|Caenorhabditis elegans Hypothetical
           protein F45D3.5 protein.
          Length = 685

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 684 HYEDGLNLLRSAANRDHAPALYNLGLCYEMGL----GVSVNEKMAMELYXSAATLHHPXA 851
           +YE  L LL  +A++ +A     L   +  G+    GV  + K +++LY  A+   H  A
Sbjct: 382 NYEKALKLLTLSADKKNADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILA 441

Query: 852 LYNLGIYYGQG 884
            YNL   +  G
Sbjct: 442 YYNLAQMHAAG 452


>U50829-1|AAC47113.1|  685|Caenorhabditis elegans SEL-1 protein.
          Length = 685

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 684 HYEDGLNLLRSAANRDHAPALYNLGLCYEMGL----GVSVNEKMAMELYXSAATLHHPXA 851
           +YE  L LL  +A++ +A     L   +  G+    GV  + K +++LY  A+   H  A
Sbjct: 382 NYEKALKLLTLSADKKNADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILA 441

Query: 852 LYNLGIYYGQG 884
            YNL   +  G
Sbjct: 442 YYNLAQMHAAG 452


>U50828-1|AAC47112.1|  685|Caenorhabditis elegans sel-1 protein.
          Length = 685

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 684 HYEDGLNLLRSAANRDHAPALYNLGLCYEMGL----GVSVNEKMAMELYXSAATLHHPXA 851
           +YE  L LL  +A++ +A     L   +  G+    GV  + K +++LY  A+   H  A
Sbjct: 382 NYEKALKLLTLSADKKNADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILA 441

Query: 852 LYNLGIYYGQG 884
            YNL   +  G
Sbjct: 442 YYNLAQMHAAG 452


>Z81487-6|CAB03996.2|  872|Caenorhabditis elegans Hypothetical
           protein C54E10.1 protein.
          Length = 872

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +3

Query: 600 RKNSSENDLG-QVLNSIENQLGLAAIENGHY 689
           RK++ E  LG +V+N I +QL    +++ HY
Sbjct: 379 RKSNMERSLGSEVMNDISSQLLFGTVDSNHY 409


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,783,029
Number of Sequences: 27780
Number of extensions: 391320
Number of successful extensions: 977
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)