Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_M20
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 33 0.071
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 29 1.2
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 28 2.0
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 2.0
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 27 2.7
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 27 4.7
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 4.7
SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subuni... 26 8.2
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 26 8.2
SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr ... 26 8.2
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 32.7 bits (71), Expect = 0.071
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = -1
Query: 744 SSLLYKNGVRIIGFVNEVVVFLVNAILSCGFRINEAILHLCYVNFLQHFHIHKHFRVY 571
S++L ++ I + + V +++A++ G + ++L C+VN H H+ R+Y
Sbjct: 906 STVLSRDDAFSIHVIEQTVKTVISALIRLGKDFDSSLLVSCFVNAFPHIPQHRRLRLY 963
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 767 EDIGMNAYYYYFHSHLPFWWTSEKYGALKSVVERXLLL 880
+DIGM AY L F W S+++G ++ ++L
Sbjct: 118 QDIGMIAYVGTIVGQLSFGWYSDRFGRKNGMITATIIL 155
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -1
Query: 276 RYHSLCQFYNIHHQ--CLVGSHLG 211
+Y++ C FYNI H C G LG
Sbjct: 35 KYYNFCPFYNIQHNYTCQTGDPLG 58
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 827 STRTVNESGSSSSKRSCQYPQ*SMSAFVLH 738
+T TV+ESGSSS+ + YP ++S H
Sbjct: 592 TTSTVSESGSSSASITSTYPSSTLSMTTSH 621
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 189 QKKILSFFQDVSQLNTDDEYYKIGKDY-DIEMNMDNYTNKKAVEEFLKMYRTGFMP 353
+ K+ D + L DD KD+ ++ +N +Y NK ++ F + + F P
Sbjct: 617 EMKLSDKIDDANSLKDDDFIQGSKKDFFEMNLNHSSYQNKDELKPFQLLVKHAFKP 672
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 686 TTTSFTKPIILTPFLYNNEEQRLTYFTEDIGMNAYYYYFHSHL 814
T + ++ L P + + Q++ Y ++ N+Y Y HSH+
Sbjct: 297 TDSELSEEAFLLPAQASRKTQKIHYINDNDPSNSYSSYQHSHV 339
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 573 YFIRSRNNETRGNQSAG*QRCRRHTRID 490
Y + S+NN + Q+A +CR T +D
Sbjct: 99 YILSSKNNPNQNPQAAALTKCREQTFVD 126
>SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subunit
Rpa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1227
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 719 TPFLYNNEEQRLTYFTEDIGMNAYYYY 799
TPF+Y+ ++ YF E + Y Y+
Sbjct: 1020 TPFIYSEQQTAADYFGEQLVKAGYNYH 1046
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 201 LSFF--QDVSQLNTDDEYYKIGKDYDIEMNMDN 293
L+FF Q+V Q+N +DEY + + D E +DN
Sbjct: 49 LNFFSTQNVMQMNFEDEYSEFSNE-DDEAEIDN 80
>SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 495
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = -1
Query: 648 INEAILHLCYVNFLQHFHIHKHFRVYFIRSRNNETRGNQSAG*Q 517
+ E + C V ++++ ++ Y + S +N +GN S G Q
Sbjct: 253 VAETMTLCCIVTIFYDKNVNRQWKQYILTSVSNMDKGNPSGGSQ 296
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,474,554
Number of Sequences: 5004
Number of extensions: 70570
Number of successful extensions: 236
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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