Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_M18
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    24   1.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   2.2  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    24   2.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.9  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   6.7  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   6.7  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 352 DRGKLTGQAYGTRVLGPGGDSTSYGG 429
           D+  +TG AYG   + PG  S  + G
Sbjct: 66  DKNGMTGDAYGGLNIRPGQPSRQHAG 91


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 691 CLVKPRSMNKILSKNIVI 744
           CL+ PR +  ILS N+ I
Sbjct: 92  CLIDPRDVEIILSSNVYI 109


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 786 NYRTQINSYKSIDFYNNVFRQNF 718
           NY    N+Y + + YNN +  N+
Sbjct: 326 NYNNYNNNYNNYNNYNNNYNNNY 348


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 457 WRSHWPSLDDHRNWY 413
           W +H P+ D   NWY
Sbjct: 661 WLNHSPNYDQVTNWY 675


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 667 KCRLDKHSCLVKPRSMNKIL 726
           KC LD+  C  + R + KIL
Sbjct: 45  KCMLDEGPCTNEGRELKKIL 64


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 667 KCRLDKHSCLVKPRSMNKIL 726
           KC LD+  C  + R + KIL
Sbjct: 45  KCMLDEGPCTNEGRELKKIL 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,302
Number of Sequences: 438
Number of extensions: 4436
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)