Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_M15
         (895 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008769-1|AAH08769.1|  630|Homo sapiens coiled-coil domain cont...    31   7.5  
AF293025-1|AAG02115.1|  236|Homo sapiens steroid receptor RNA ac...    30   9.9  

>BC008769-1|AAH08769.1|  630|Homo sapiens coiled-coil domain
           containing 120 protein.
          Length = 630

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 139 SSLILIIERVAGKQTGSLPVPAHAVATGPP 50
           SS  L+++R AG   GS P P    A+GPP
Sbjct: 360 SSEALLVDRAAGGGAGSPPAPLAPSASGPP 389


>AF293025-1|AAG02115.1|  236|Homo sapiens steroid receptor RNA
           activator isoform 2 protein.
          Length = 236

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -1

Query: 127 LIIERVAGKQTGSLPVPAHAVATGPP 50
           L+I+RVA  Q GS  VPA   + GPP
Sbjct: 48  LLIKRVAAPQDGSPRVPASETSPGPP 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,156,141
Number of Sequences: 237096
Number of extensions: 1882779
Number of successful extensions: 3432
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3432
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)