Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_M08
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0261 - 2007522-2007590,2007684-2007926,2008008-2008106,200...    34   0.13 
04_03_0263 - 13605195-13607366,13607535-13607702                       31   1.2  

>03_01_0261 -
           2007522-2007590,2007684-2007926,2008008-2008106,
           2008214-2008693,2008806-2008904,2009097-2009218,
           2009296-2009414,2009492-2009559,2009832-2010017,
           2010323-2010425,2010477-2010556,2010638-2010694,
           2010771-2010913,2010988-2011132,2011501-2011662,
           2011759-2011944,2012273-2012365,2012893-2013053,
           2013440-2013547,2013664-2013928
          Length = 995

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -2

Query: 676 ELVPESFSNALFKSELR-VTFGSPMLSHVNVSGWTSKC*TPLSSFFKL*PYLTAPMTFVS 500
           E+V  S    +FKS    +T G+PM + ++VS  T     P S++    PY    MT   
Sbjct: 699 EVVKSSVLPDMFKSTYEAITKGNPMWNELSVSASTLYPWDPTSTYIHEPPYF-KDMTMSP 757

Query: 499 AV*SPVKDFDCLVN 458
               PVKD  CL+N
Sbjct: 758 PGPRPVKDAYCLLN 771


>04_03_0263 - 13605195-13607366,13607535-13607702
          Length = 779

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 28/81 (34%), Positives = 37/81 (45%)
 Frame = +3

Query: 519 AVRYGYNLKNDDNGVQHFEVQPETFTCESIGEPKVTLSSDLNSALEKDSGTNSLDPDTEP 698
           A RYG   +ND NG        E F+ +SI   KV  +S   SA  K   T S DP  + 
Sbjct: 357 AFRYG---QNDSNG--ECRSVTEVFSLQSIQPEKVNYNS---SAYLKVQITPSSDPTQKK 408

Query: 699 LKTLRQAAICKIAESCYINVV 761
           LKT+  A +  I     + +V
Sbjct: 409 LKTILGATLAAITTLVLVVIV 429


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,517,193
Number of Sequences: 37544
Number of extensions: 473998
Number of successful extensions: 1004
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)