Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_M08
         (878 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067450-1|AAH67450.1|  334|Homo sapiens GPR12 protein protein.        30   9.6  
BC039318-1|AAH39318.1|  236|Homo sapiens baculoviral IAP repeat-...    30   9.6  

>BC067450-1|AAH67450.1|  334|Homo sapiens GPR12 protein protein.
          Length = 334

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = -2

Query: 406 TVLALVSIWKSDICWFFRPVM-FKFLKRITTPASFGAITSNDVTTSGSIGHMSYCGIPLL 230
           T + LV +W + IC    PVM +  L+  +T +    +T N+     S+  +S   + L 
Sbjct: 157 TYVMLVMLWGTSICLGLLPVMGWNCLRDESTCSVVRPLTKNNAAIL-SVSFLSMFALMLQ 215

Query: 229 VFSKNCSVALLRHCMSPSLQ 170
           ++ + C + ++RH    +LQ
Sbjct: 216 LYIQICKI-VMRHAHQIALQ 234


>BC039318-1|AAH39318.1|  236|Homo sapiens baculoviral IAP
           repeat-containing 8 protein.
          Length = 236

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +3

Query: 519 AVRYGYNLKNDDNGVQHFEVQPETFTCESIGEPKVTLSSDLNSALEKDSGTNSLDPDT-- 692
           A+R G++ K D   +    +Q      +++G     L S      E +    SL  +   
Sbjct: 118 AIRMGFDFK-DVKKIMEERIQTSGSNYKTLGVLVADLVSAQKDTTENELNQTSLQREISP 176

Query: 693 -EPLKTLRQAAICKIAESCYINVV 761
            EPL+ L++  +CKI    +I VV
Sbjct: 177 EEPLRRLQEEKLCKICMDRHIAVV 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,808,650
Number of Sequences: 237096
Number of extensions: 2558382
Number of successful extensions: 4798
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4798
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)