Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_M05
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 258 5e-69
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 258 5e-69
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 258 5e-69
U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catal... 249 2e-66
Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2 prot... 248 3e-66
AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical ... 248 3e-66
AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical... 240 8e-64
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 34 0.12
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 34 0.12
Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 4.4
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 4.4
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 4.4
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 28 7.7
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 28 7.7
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 28 7.7
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 258 bits (631), Expect = 5e-69
Identities = 116/166 (69%), Positives = 137/166 (82%)
Frame = +2
Query: 146 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 326 ERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTV 505
ERIPERVVHAKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSADT
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTA 122
Query: 506 RDPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNP 643
RDPRGFA+KFYT++G WDLVGNNTPIFFIRDP FP+FIHTQKRNP
Sbjct: 123 RDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNP 168
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = +3
Query: 603 HYSRVLSILRRETLATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSH 782
H+ + +R THLKDP+M +D RPE +HQ+++LF DRG+PDGYRHMNGYGSH
Sbjct: 156 HFPNFIHTQKRNP-QTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGSH 214
Query: 783 TFKLXEFSRCWVLGKXHYKTXRG*K 857
TFK+ + K H+K +G K
Sbjct: 215 TFKMVNKDGKAIYVKFHFKPTQGVK 239
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 258 bits (631), Expect = 5e-69
Identities = 116/166 (69%), Positives = 137/166 (82%)
Frame = +2
Query: 146 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 326 ERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTV 505
ERIPERVVHAKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSADT
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTA 122
Query: 506 RDPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNP 643
RDPRGFA+KFYT++G WDLVGNNTPIFFIRDP FP+FIHTQKRNP
Sbjct: 123 RDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNP 168
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = +3
Query: 603 HYSRVLSILRRETLATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSH 782
H+ + +R THLKDP+M +D RPE +HQ+++LF DRG+PDGYRHMNGYGSH
Sbjct: 156 HFPNFIHTQKRNP-QTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGSH 214
Query: 783 TFKLXEFSRCWVLGKXHYKTXRG*K 857
TFK+ + K H+K +G K
Sbjct: 215 TFKMVNKDGKAIYVKFHFKPTQGVK 239
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 258 bits (631), Expect = 5e-69
Identities = 116/166 (69%), Positives = 137/166 (82%)
Frame = +2
Query: 146 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 326 ERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTV 505
ERIPERVVHAKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSADT
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTA 122
Query: 506 RDPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNP 643
RDPRGFA+KFYT++G WDLVGNNTPIFFIRDP FP+FIHTQKRNP
Sbjct: 123 RDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNP 168
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = +3
Query: 603 HYSRVLSILRRETLATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSH 782
H+ + +R THLKDP+M +D RPE +HQ+++LF DRG+PDGYRHMNGYGSH
Sbjct: 156 HFPNFIHTQKRNP-QTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGSH 214
Query: 783 TFKLXEFSRCWVLGKXHYKTXRG*K 857
TFK+ + K H+K +G K
Sbjct: 215 TFKMVNKDGKAIYVKFHFKPTQGVK 239
>U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catalase
protein.
Length = 496
Score = 249 bits (609), Expect = 2e-66
Identities = 118/180 (65%), Positives = 139/180 (77%)
Frame = +2
Query: 146 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 326 ERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTV 505
ERIPERVVHAKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTV
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDITKYGKADMFHKVGKQTPLLVRFSTVAGESGSADTV 122
Query: 506 RDPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPGNTSERSRHVLGPF 685
RDPRGF++KFYT++G WDLVGNNTPIFFIRD FP+FIH KRNP T R + L F
Sbjct: 123 RDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNP-QTHMRDPNALFDF 181
Score = 75.4 bits (177), Expect = 5e-14
Identities = 34/79 (43%), Positives = 51/79 (64%)
Frame = +3
Query: 603 HYSRVLSILRRETLATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSH 782
H+ + L+R TH++DP+ +D RPE+I Q+++L+ DRGIPDG+R MNGYG+H
Sbjct: 156 HFPNFIHALKRNP-QTHMRDPNALFDFWMNRPESI-QVMFLYSDRGIPDGFRFMNGYGAH 213
Query: 783 TFKLXEFSRCWVLGKXHYK 839
TFK+ + K H+K
Sbjct: 214 TFKMVNKEGNPIYCKFHFK 232
>Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2
protein.
Length = 497
Score = 248 bits (608), Expect = 3e-66
Identities = 118/180 (65%), Positives = 139/180 (77%)
Frame = +2
Query: 146 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 326 ERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTV 505
ERIPERVVHAKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTV
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTV 122
Query: 506 RDPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPGNTSERSRHVLGPF 685
RDPRGF++KFYT++G WDLVGNNTPIFFIRD FP+FIH KRNP T R + L F
Sbjct: 123 RDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNP-QTHMRDPNALFDF 181
Score = 85.4 bits (202), Expect = 5e-17
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +3
Query: 603 HYSRVLSILRRETLATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSH 782
H+ + L+R TH++DP+ +D RPE+IHQ+++L+ DRGIPDG+R MNGYG+H
Sbjct: 156 HFPNFIHALKRNP-QTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGAH 214
Query: 783 TFKLXEFSRCWVLGKXHYKTXRG*K 857
TFK+ + K H+K +G K
Sbjct: 215 TFKMVNKEGNPIYCKFHFKPAQGSK 239
>AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.6 protein.
Length = 497
Score = 248 bits (608), Expect = 3e-66
Identities = 118/180 (65%), Positives = 139/180 (77%)
Frame = +2
Query: 146 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 326 ERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTV 505
ERIPERVVHAKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTV
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTV 122
Query: 506 RDPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPGNTSERSRHVLGPF 685
RDPRGF++KFYT++G WDLVGNNTPIFFIRD FP+FIH KRNP T R + L F
Sbjct: 123 RDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNP-QTHMRDPNALFDF 181
Score = 85.4 bits (202), Expect = 5e-17
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +3
Query: 603 HYSRVLSILRRETLATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSH 782
H+ + L+R TH++DP+ +D RPE+IHQ+++L+ DRGIPDG+R MNGYG+H
Sbjct: 156 HFPNFIHALKRNP-QTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGAH 214
Query: 783 TFKLXEFSRCWVLGKXHYKTXRG*K 857
TFK+ + K H+K +G K
Sbjct: 215 TFKMVNKEGNPIYCKFHFKPAQGSK 239
>AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical
protein Y54G11A.13 protein.
Length = 512
Score = 240 bits (588), Expect = 8e-64
Identities = 117/194 (60%), Positives = 140/194 (72%), Gaps = 1/194 (0%)
Frame = +2
Query: 107 PHSKKGTYKMASRDP-ATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALL 283
PH T P A DQL Y+ ++ P +TT +GAP+ KTA+ T G+ GP L+
Sbjct: 5 PHMVNLTVNDTKPGPMAEDQLKAYRDRNQE-PHLLTTSNGAPIYSKTAVLTAGRRGPMLM 63
Query: 284 QDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVR 463
QD+ ++DEM+ FDRERIPERVVHAKG GA GYFEVTHDITKY A +F +GK+TP+ VR
Sbjct: 64 QDIVYMDEMAHFDRERIPERVVHAKGGGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVR 123
Query: 464 FSTVGGESGSADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNP 643
FSTV GESGSADTVRDPRGF++KFYT++G WDLVGNNTPIFFIRD FP+FIH KRNP
Sbjct: 124 FSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNP 183
Query: 644 GNTSERSRHVLGPF 685
T R + L F
Sbjct: 184 -QTHMRDPNALFDF 196
Score = 85.4 bits (202), Expect = 5e-17
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +3
Query: 603 HYSRVLSILRRETLATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSH 782
H+ + L+R TH++DP+ +D RPE+IHQ+++L+ DRGIPDG+R MNGYG+H
Sbjct: 171 HFPNFIHALKRNP-QTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGAH 229
Query: 783 TFKLXEFSRCWVLGKXHYKTXRG*K 857
TFK+ + K H+K +G K
Sbjct: 230 TFKMVNKEGNPIYCKFHFKPAQGSK 254
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 149 PATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
P T Q +NY LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 149 PATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 325
P T Q +NY LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical
protein C23H4.2 protein.
Length = 583
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +2
Query: 164 LINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQ-----DVNF-LDEMSSFDR 325
L N+ K K SPG+ G ++ + + ++GP +L+ DV+F + EM+ FD+
Sbjct: 423 LTNFTKHGKPSPGWDPVDPGRMNYLELKVDSKARSGPVMLEGYHAKDVSFWVGEMTEFDQ 482
Query: 326 ERIPERVVHAKG 361
++ H++G
Sbjct: 483 N--VSKMRHSEG 492
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 546 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 546 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 546 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 1070 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1099
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 546 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 1048 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1077
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 546 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 546 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 457
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.7
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = +2
Query: 167 INYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERV 346
I+ K+ L S G I ++G+ K A Q G G + +DV +D++ S + I +
Sbjct: 90 IHTKEKLMRSEGIIPIQAGSN---KYASQK-GMTGFGVPRDV--IDKVKSDNLAEITDEK 143
Query: 347 VHAKGAGAFGYFEVTHDITKY 409
A AG G+ H+ITKY
Sbjct: 144 KIANQAGMTGFGMPRHNITKY 164
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 206 ITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFE 385
+ T+ PV I I + N P Q + + +S D + + V +GAFG +
Sbjct: 83 VPTRRSEPVTITIHILDINDNSPQFEQPIYMANTTASGDERDVVKVVATDVDSGAFG--Q 140
Query: 386 VTHDITK 406
VT+ I +
Sbjct: 141 VTYTIAQ 147
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +2
Query: 206 ITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGAFGYFE 385
+ T+ PV I I + N P Q + + +S D + + V +GAFG +
Sbjct: 83 VPTRRSEPVTITIHILDINDNSPQFEQPIYMANTTASGDERDVVKVVATDVDSGAFG--Q 140
Query: 386 VTHDITK 406
VT+ I +
Sbjct: 141 VTYTIAQ 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,874,117
Number of Sequences: 27780
Number of extensions: 470106
Number of successful extensions: 1273
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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