Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_M04
(887 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 27 0.23
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 25 1.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 3.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 4.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 8.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 8.6
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 8.6
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.1 bits (57), Expect = 0.23
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = +3
Query: 78 PNKMKLLVVFAMCMLAASAGVVELSADTSNQDLEEKLYNSILTGDYDSAVRQSLEYESQG 257
P +KLLV+ + + + ++ E+++ ++IL G YD+ +R S E + G
Sbjct: 3 PGVLKLLVLLTFLLHPSRC----TQGKVNYREKEKEVLDNIL-GGYDARIRPSGENATDG 57
Query: 258 KGSIIQNVVNNLIIDKRRNTMEYCYKL 338
+ N+ I TMEY +L
Sbjct: 58 PAVVRVNIFVRSISKIDDVTMEYSVQL 84
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 24.6 bits (51), Expect = 1.2
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +3
Query: 78 PNKMKLLVVFAMCMLAASAGVVELSADTSNQDLEEKLYNSILTGDYDSAVRQSLEYESQG 257
P +KLLV+ + + + ++ E+++ ++IL G YD+ +R S E + G
Sbjct: 3 PGVLKLLVLLTFLLHPSRC----TQGKVNYREKEKEVLDNIL-GGYDARIRPSGENATDG 57
Query: 258 KGSIIQNVVNNLIIDKRRNTMEYCYKL 338
+ N+ I MEY +L
Sbjct: 58 PAIVRVNLFVRSIATISDIKMEYSVQL 84
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 154 ADSSTTPALAASMHIANTTRSFILLGAFQI 65
A+ + +A +HI+N T SF L G F++
Sbjct: 396 ANKMESSGMAGRVHISNATLSF-LNGEFEV 424
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 554 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 649
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 554 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 649
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 554 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 649
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 554 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 649
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 554 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 649
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 554 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 649
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 554 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 649
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 8.6
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 212 VAGEDAVVQFLLEVLVRSVRG*FNDARAGGEHAHRKYNEKFHFVRSLSDRLQVC 51
+ GE V FL ++V DA+ + YN+ V + SD L+VC
Sbjct: 4 IIGETLRVWFLSALVVHGAVAGNPDAKRLYDDLLSNYNKLVRPVVNTSDVLRVC 57
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 8.6
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 212 VAGEDAVVQFLLEVLVRSVRG*FNDARAGGEHAHRKYNEKFHFVRSLSDRLQVC 51
+ GE V FL ++V DA+ + YN+ V + SD L+VC
Sbjct: 4 IIGETLRVWFLSALVVHGAVAGNPDAKRLYDDLLSNYNKLVRPVVNTSDVLRVC 57
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 808 RPCVSRGVHDRTELQGIVELAIVDEEQDVVFV 713
R C G+HD + Q V +VD D+V +
Sbjct: 168 RNCELVGLHDLDQSQEYVRSKLVDFLNDLVAI 199
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,786
Number of Sequences: 438
Number of extensions: 5317
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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