Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_M03
(994 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.14
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.19
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.19
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.44
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.3
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 4.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 7.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 9.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.007
Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = +1
Query: 793 PPPPPGAXXPXXRXXXPGPAXXAPXARXAG--PXPPPXP---GXXPPPXP 927
PPPPP P P P P A G P PPP P G PPP P
Sbjct: 733 PPPPPAVIVPTPA---PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 35.1 bits (77), Expect = 0.015
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 639 PSPGPRLGXXPXPPPAPXXTXXXPPXPXP 725
P P P +G P PPP P PP P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 30.7 bits (66), Expect = 0.33
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 620 GPPGQXPLPRXAARXXPPPPPXP 688
GPP P P A PPPPP P
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.44
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 624 PXXRXPSPGPRLGXXPXPPPAPXXTXXXPPXPXP 725
P P+P P P PPPAP PP P P
Sbjct: 737 PAVIVPTPAP--APIPVPPPAPIMGGPPPPPPPP 768
Score = 30.3 bits (65), Expect = 0.44
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +1
Query: 796 PPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXPAXRXXXRGXAXSPPXX 975
P P P GP P AG PPP P PPP R A +P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP---PPPPAVSAGGSRYYAPAPQAE 800
Query: 976 XXP 984
P
Sbjct: 801 PEP 803
Score = 29.9 bits (64), Expect(2) = 0.002
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 604 VVPSXXPPXXXAPPPXRGSGVXPXPPXPP 690
+VP+ P PPP G P PP PP
Sbjct: 740 IVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 29.5 bits (63), Expect = 0.77
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 622 PPXXXAPPPXRGSGVXPXPPXPP 690
PP PP G+G P PP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 607 VPSXXPPXXXAPPPXRGSGVXPXPPXPPXXPXP 705
VP P PPP GV P PP P P
Sbjct: 751 VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect(2) = 0.002
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +1
Query: 793 PPPPPG-AXXPXXRXXXPGPAXXAPXARXAGPXPPPXP 903
PPPPPG A P PA A +R P P P
Sbjct: 764 PPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 25.8 bits (54), Expect = 9.5
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 787 GXPPPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXP 927
G PPPPP P P P P A AG P P P
Sbjct: 759 GGPPPPP--PPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +1
Query: 796 PPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXP----GXXPPPXPAXRXXXRGXAXS 963
PPPP P R G P R A P PPP G PPP + R A
Sbjct: 337 PPPP----PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Query: 964 P 966
P
Sbjct: 393 P 393
Score = 31.5 bits (68), Expect = 0.19
Identities = 28/114 (24%), Positives = 29/114 (25%), Gaps = 7/114 (6%)
Frame = +1
Query: 610 PSXXPPXXXAPPPXRGSGVXPXPPXPPXX-PXPXXXXXXXXXXXXXXXXXXXXXRGXXXX 786
P P PPP S PP PP P
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Query: 787 GXPPPPPGAXXPXXRXXXPGPAXXAPXARXAGPXP------PPXPGXXPPPXPA 930
PP P + P P P A A P P PP P P P PA
Sbjct: 426 SAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 7/66 (10%)
Frame = +1
Query: 793 PPPPPGAXXPXXRXXXPG-------PAXXAPXARXAGPXPPPXPGXXPPPXPAXRXXXRG 951
PPPPP G P P + AG P P G PP P R
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 952 XAXSPP 969
PP
Sbjct: 373 GRQPPP 378
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 4/37 (10%)
Frame = +2
Query: 860 PPXPXXRARX----PPPXXGXPPPPXPXXXPXPGXXP 958
PP P A PP PPPP P P G P
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP 376
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 787 GXPPPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXP 915
G P PP P AP A P PPP P P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = +1
Query: 793 PPPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXPAXRXXXRGXAXSPPX 972
PPPPP P P + + P PP PG P P R +PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP-PPAIPGRSAPALPPLGNASR--TSTPPV 417
Query: 973 XXXP 984
P
Sbjct: 418 PTPP 421
Score = 27.1 bits (57), Expect = 4.1
Identities = 26/117 (22%), Positives = 30/117 (25%), Gaps = 2/117 (1%)
Frame = +1
Query: 625 PXXXAPPPXRGSGVXPXPPXPPXXPXPXXXXXXXXXXXXXXXXXXXXXRGXXXXGXPPPP 804
P PP +G P PP P P PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPP-----PPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 805 PGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPP--PXPAXRXXXRGXAXSPP 969
P A P + + P PP P PP P A G +PP
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 23.8 bits (49), Expect(2) = 4.2
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 620 GPPGQXPLPRXAARXXPPPPPXP 688
G P PLP A P P P P
Sbjct: 462 GMPAAPPLPPAAPAPPPAPAPAP 484
Score = 21.4 bits (43), Expect(2) = 4.2
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 503 AAXPPPXPAGXPGXP 547
A PP PAG P P
Sbjct: 453 APIAPPLPAGMPAAP 467
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.19
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 7/68 (10%)
Frame = -3
Query: 968 GGEXAXPRXXXRXAGXGG-----GXXPGXGGGXGPAXRAXGAXXAGPGXXXRXXG--XXA 810
GG P G GG G G GGG G G GPG G
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Query: 809 PGGGGGXP 786
PGG GG P
Sbjct: 258 PGGFGGGP 265
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 968 GGEXAXPRXXXRXAGXGGGXXPGXGGGXGPAXRAXGAXXAGPG 840
GG P G GG G GGG G G GPG
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 966 GXXGXXPGXGXXXGXGGGGXPXXGGGXRARXXGXGG 859
G G G G G GGG GGG G GG
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -3
Query: 926 GXGGGXXPGXGGGXGPAXRAXGAXXAGPGXXXRXXGXXAPGGGGGXP 786
G GG G GGG G G G GG GG P
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP 230
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.19
Identities = 27/108 (25%), Positives = 31/108 (28%)
Frame = +1
Query: 607 VPSXXPPXXXAPPPXRGSGVXPXPPXPPXXPXPXXXXXXXXXXXXXXXXXXXXXRGXXXX 786
+PS P APP SG+ P P P P
Sbjct: 1073 IPSIPAPSG-APPVPAPSGIPPVPK--PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVA 1129
Query: 787 GXPPPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXPA 930
P P P P + P AP +G P P P PP PA
Sbjct: 1130 APPVPVPSGAPPVPKPSVAAPPVPAP----SGAPPVPKPSVAAPPVPA 1173
Score = 30.7 bits (66), Expect = 0.33
Identities = 24/108 (22%), Positives = 27/108 (25%)
Frame = +1
Query: 604 VVPSXXPPXXXAPPPXRGSGVXPXPPXPPXXPXPXXXXXXXXXXXXXXXXXXXXXRGXXX 783
V S P PP + S P P P P
Sbjct: 1000 VSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGA 1059
Query: 784 XGXPPPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXP 927
PPP P P P+ P +G P P P PP P
Sbjct: 1060 PSAPPPVPAPSSEI--PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 29.9 bits (64), Expect = 0.58
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 5/42 (11%)
Frame = +3
Query: 621 APXXRXPSPGPRLGXXPXP-----PPAPXXTXXXPPXPXPXG 731
AP P P P + P P PP P + PP P P G
Sbjct: 1116 APSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
Score = 29.1 bits (62), Expect = 1.0
Identities = 25/107 (23%), Positives = 30/107 (28%)
Frame = +1
Query: 607 VPSXXPPXXXAPPPXRGSGVXPXPPXPPXXPXPXXXXXXXXXXXXXXXXXXXXXRGXXXX 786
+P P APP + S P P P P P +
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP-PVPKPSVAAPPVPVPSGAPPVPK-PSVA 1148
Query: 787 GXPPPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXP 927
P P P P + P AP + G P P P PP P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSS---GIPPVPKPAAGVPPVP 1192
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 607 VPSXXPPXXXAPPPXRGSGVXPXPPXPPXXPXP 705
VP PP P P GV P PP P P
Sbjct: 1188 VPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Frame = +3
Query: 624 PXXRXPSPGPRLGXXPXPPPA-----PXXTXXXPPXPXP 725
P P P P +G P PPP+ P + PP P P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 27.5 bits (58), Expect = 3.1
Identities = 28/108 (25%), Positives = 31/108 (28%), Gaps = 2/108 (1%)
Frame = +1
Query: 610 PSXXPPXXXAPPPXRGSGVXPXP-PXPPXXPXPXXXXXXXXXXXXXXXXXXXXXRGXXXX 786
P P APP SG P P P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS---- 1176
Query: 787 GXPP-PPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXP 927
G PP P P A P P P+ P + + PP P PP P
Sbjct: 1177 GIPPVPKPAAGVP----PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Frame = +3
Query: 639 PSPGPRLGXXPXPPPA-----PXXTXXXPPXPXP 725
P P P G P PPP+ P + PP P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/67 (23%), Positives = 20/67 (29%)
Frame = +1
Query: 793 PPPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXPAXRXXXRGXAXSPPX 972
P P P P + P P A P P P P P P+ + + P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSG--APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Query: 973 XXXPXXG 993
P G
Sbjct: 1171 VPAPSSG 1177
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Frame = +3
Query: 624 PXXRXPSPGPRLGXXPXP-----PPAPXXTXXXPPXPXP 725
P P P P + P P PP P + PP P P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 3/42 (7%)
Frame = +2
Query: 842 PGRXXRPPXPXXRARXPP---PXXGXPPPPXPXXXPXPGXXP 958
P PP P PP P G PP P P P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 25.8 bits (54), Expect = 9.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 639 PSPGPRLGXXPXPPPAPXXTXXXPPXPXP 725
P P P G P P PA PP P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.44
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = +1
Query: 793 PPPPPGAXXPXXRXXXPGPAXXAPXARXAGP--XPPPXPGXXP--PPXP 927
PPP P + P P P+ P A+ A P PP P PP P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +1
Query: 802 PPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXPAXRXXXRGXAXSPPXXXX 981
PP + P P PA P A P P P PP PA A S P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP---PPAQPAAPVKSPPSAPSLPSAVP 195
Query: 982 P 984
P
Sbjct: 196 P 196
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +1
Query: 847 PAXXAPXARXAGPXPPPXPGXXPPPXPAXRXXXRGXAXSPP 969
P AP A P PPP P PPP P+ G +PP
Sbjct: 1694 PQSAAPPQMSA-PTPPPPPMSVPPP-PSAPPMPAGPPSAPP 1732
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +1
Query: 610 PSXXPPXXXAPPPXRGSGVXPXPPXPPXXPXP 705
P+ PP PPP + PP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +1
Query: 793 PPPPPGAXXPXXRXXXPGPAXXA-PXARXAGPXPPPXPGXXPPPXPA 930
P P A P P P + P A P P P PPP PA
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/42 (28%), Positives = 14/42 (33%)
Frame = +2
Query: 842 PGRXXRPPXPXXRARXPPPXXGXPPPPXPXXXPXPGXXPXXP 967
P P ++ PP PPP P P P P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +1
Query: 793 PPPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXP 927
PPPPP + P P A P + P PPP P P P
Sbjct: 1707 PPPPPMSVPP------PPSAPPMPAGPPSAP-PPPLPASSAPSVP 1744
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +2
Query: 860 PPXPXXRARXPPPXXGXPPPPXPXXXPXPGXXPXXP 967
PP PPP PPP P P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 624 PXXRXPSPGPRLGXXPXPPPAPXXTXXXPPXPXP 725
P P+P P P PP AP P P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.8
Identities = 29/129 (22%), Positives = 31/129 (24%), Gaps = 11/129 (8%)
Frame = +1
Query: 610 PSXXPPXXXAPPPXRGSGVXPXPPXPPXXP---------XPXXXXXXXXXXXXXXXXXXX 762
PS PP AP S P PP PP P
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYT 228
Query: 763 XXRGXXXXGXPPPPPGAXXP--XXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXPAXR 936
+ PPPPP P P P+ PPP PP P
Sbjct: 229 PKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPPTN 288
Query: 937 XXXRGXAXS 963
R S
Sbjct: 289 ASTRSTGTS 297
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 869 PXXRARXPPPXXGXPPPPXPXXXPXPG 949
P PPP G PP P P PG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 893 PPXXGXPPPPXPXXXPXPGXXPXXPXXXXXRXR 991
PP PPPP P P P P P + R
Sbjct: 5 PPGNPPPPPPPPGFEP-PSQPPPPPPPGYVKKR 36
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 796 PPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPP 921
PPPP P A A A P PPP P P
Sbjct: 366 PPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPAAAP 407
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 7.2
Identities = 23/106 (21%), Positives = 24/106 (22%)
Frame = +1
Query: 610 PSXXPPXXXAPPPXRGSGVXPXPPXPPXXPXPXXXXXXXXXXXXXXXXXXXXXRGXXXXG 789
P+ P PPP P PP P
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 257
Query: 790 XPPPPPGAXXPXXRXXXPGPAXXAPXARXAGPXPPPXPGXXPPPXP 927
PPPP P P P P P PG PP P
Sbjct: 258 HMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHHEPGEHMPPPP 302
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 939 GXXXGXGGGGXPXXGGGXRARXXGXGGRXXRPG 841
G G GGG GGG G GGR G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.143 0.499
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,868,047
Number of Sequences: 5004
Number of extensions: 24519
Number of successful extensions: 304
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 513276802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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