Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_L23
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.014
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.014
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.014
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 0.11
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.13
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 33 0.39
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 33 0.39
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.1
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.1
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 2.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 3.6
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 3.6
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.6
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.6
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 25 4.4
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.8
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 4.8
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 4.8
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 4.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.8
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 29 6.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 6.3
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 29 6.3
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.3
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 8.3
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 8.3
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 8.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.3
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 8.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.014
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = -1
Query: 655 PPXGXXAPPPPXPXXXXXXXXXXXXXXXXXXXXFXGGGGGXFXGGKXPPPPXXGGXXKXX 476
PP PPPP P GG GG PPPP GG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPP-------GGLPPISGGPPPPPPPPGG---CP 769
Query: 475 PPGAPPXXXGFXGG 434
PP PP GF GG
Sbjct: 770 PPPPPPPPGGFKGG 783
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 438 PKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
P P GG P PP GG PP PPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP--PPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.014
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = -1
Query: 655 PPXGXXAPPPPXPXXXXXXXXXXXXXXXXXXXXFXGGGGGXFXGGKXPPPPXXGGXXKXX 476
PP PPPP P GG GG PPPP GG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPP-------GGLPPISGGPPPPPPPPGG---CP 769
Query: 475 PPGAPPXXXGFXGG 434
PP PP GF GG
Sbjct: 770 PPPPPPPPGGFKGG 783
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 438 PKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
P P GG P PP GG PP PPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP--PPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.014
Identities = 25/74 (33%), Positives = 25/74 (33%)
Frame = -1
Query: 655 PPXGXXAPPPPXPXXXXXXXXXXXXXXXXXXXXFXGGGGGXFXGGKXPPPPXXGGXXKXX 476
PP PPPP P GG GG PPPP GG
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPP-------GGLPPISGGPPPPPPPPGG---CP 352
Query: 475 PPGAPPXXXGFXGG 434
PP PP GF GG
Sbjct: 353 PPPPPPPPGGFKGG 366
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 438 PKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
P P GG P PP GG PP PPPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP--PPPPP 360
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect(2) = 0.11
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 532 FXGGKXPPPPXXGGXXKXXPP-GAPP 458
F GG PPPP GG P GAPP
Sbjct: 90 FAGGIPPPPPMMGGIPPPPPMFGAPP 115
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P GG P PP GG PP PPPP
Sbjct: 84 PPPPPMFAGGIP-----PPPPMMGGIPPPPPMFGAPPPP 117
Score = 23.4 bits (48), Expect(2) = 0.11
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 658 PPPXGXXAPPPPXP 617
PPP G PPP P
Sbjct: 75 PPPPGPGGIPPPPP 88
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.13
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +3
Query: 459 GGAPGGXXFXXPPXXGGGGXFPPXKXPPPPPXKXXXXXXXXXXXXXXXXXXXXGXGGGGA 638
GG GG GGGG P PPPPP G GGGG+
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSG-GGGGS 334
Query: 639 XXPXGG 656
GG
Sbjct: 335 SYSGGG 340
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 551 GGGGGXFXGGEXXPPPXPRGXXKXXXPGG 465
GGGGG GG PPP P G GG
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.13
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +3
Query: 459 GGAPGGXXFXXPPXXGGGGXFPPXKXPPPPPXKXXXXXXXXXXXXXXXXXXXXGXGGGGA 638
GG GG GGGG P PPPPP G GGGG+
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSG-GGGGS 334
Query: 639 XXPXGG 656
GG
Sbjct: 335 SYSGGG 340
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 551 GGGGGXFXGGEXXPPPXPRGXXKXXXPGG 465
GGGGG GG PPP P G GG
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P GGAP GGG PPPPP
Sbjct: 29 PPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPP 67
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P GGAP GGG PPPPP
Sbjct: 29 PPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPP 67
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -1
Query: 658 PPPXGXXAPPPPXPXXXXXXXXXXXXXXXXXXXXFXGGGGGXFXGGKXPPPPXXGGXXKX 479
PP G PPPP P G G GG PPPP
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG---MGGMPPPPPPGMRYPGG 346
Query: 478 XPPGAPP 458
PP PP
Sbjct: 347 MPPPPPP 353
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P G PG PP G +P PPPPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGM--RYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -1
Query: 658 PPPXGXXAPPPPXPXXXXXXXXXXXXXXXXXXXXFXGGGGGXFXGGKXPPPPXXGGXXKX 479
PP G PPPP P G G GG PPPP
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG---MGGMPPPPPPGMRYPGG 356
Query: 478 XPPGAPP 458
PP PP
Sbjct: 357 MPPPPPP 363
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P G PG PP G +P PPPPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGM--RYPGGMPPPPPP 363
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P G P PP G PP PPPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 275
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPPXK 557
PP P G P G PP GG P PPPP +
Sbjct: 297 PPPPPPPRGSPPTGSL---PPPQAGGSPPPAGTGSPPPPPR 334
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P G P PP GG PP PPPP
Sbjct: 264 PP--PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/77 (25%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = -1
Query: 679 PXXXXKXPPPXGXXAPPPPXPXXXXXXXXXXXXXXXXXXXXFXGGGGGXFXG-GKXPPPP 503
P PPP +PPPP GG G G PPPP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Query: 502 --XXGGXXKXXPPGAPP 458
+ P G+PP
Sbjct: 334 RQKRQAPERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P G P PP G PP PPPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 296
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPPXK 557
PP P G P G PP GG P PPPP +
Sbjct: 318 PPPPPPPRGSPPTGSL---PPPQAGGSPPPAGTGSPPPPPR 355
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P G P PP GG PP PPPP
Sbjct: 285 PP--PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/77 (25%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = -1
Query: 679 PXXXXKXPPPXGXXAPPPPXPXXXXXXXXXXXXXXXXXXXXFXGGGGGXFXG-GKXPPPP 503
P PPP +PPPP GG G G PPPP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Query: 502 --XXGGXXKXXPPGAPP 458
+ P G+PP
Sbjct: 355 RQKRQAPERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P G P PP G PP PPPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 281
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPPXK 557
PP P G P G PP GG P PPPP +
Sbjct: 303 PPPPPPPRGSPPTGSL---PPPQAGGSPPPAGTGSPPPPPR 340
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
PP P G P PP GG PP PPPP
Sbjct: 270 PP--PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/77 (25%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = -1
Query: 679 PXXXXKXPPPXGXXAPPPPXPXXXXXXXXXXXXXXXXXXXXFXGGGGGXFXG-GKXPPPP 503
P PPP +PPPP GG G G PPPP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Query: 502 --XXGGXXKXXPPGAPP 458
+ P G+PP
Sbjct: 340 RQKRQAPERSPPTGSPP 356
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = +3
Query: 459 GGAPGGXXFXXPPXXGGGGXFPPXKXPPPPPXKXXXXXXXXXXXXXXXXXXXXGXGGGGA 638
GG GG GGGG PPPPP G GGG
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGG 145
Query: 639 XXPXGGG 659
GGG
Sbjct: 146 GGGCGGG 152
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = +3
Query: 459 GGAPGGXXFXXPPXXGGGGXFPPXKXPPPPPXKXXXXXXXXXXXXXXXXXXXXGXGGGGA 638
GG GG GGGG PPPPP G G GG
Sbjct: 29 GGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGG 88
Query: 639 XXPXGGG 659
GGG
Sbjct: 89 GGGCGGG 95
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -1
Query: 550 GGGGGXFXG-GKXPPPPXXGGXXKXXPPGAPPXXXGFXGG 434
GGGGG G PPPP GG G G GG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 463 GPPGXXXXXXPRGXGGGXXSPPXKXPPPPP 552
GPPG P G G SP PP PP
Sbjct: 161 GPPGPDGPAGPAGPDGEAGSPAAPSPPGPP 190
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPP 545
P P PGG PP G G PP PPP
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 433 GPXKTXXXXXGPPGXXXXXXPRGXGGGXXSPPXKXPPP 546
GP PPG P G G PP PPP
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -1
Query: 526 GGKXPPPPXXGGXXKXXPPG--APPXXXGFXGG 434
GG+ P P GG PPG PP G GG
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Score = 24.6 bits (51), Expect(2) = 4.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 550 GGGGGXFXGGKXPPPPXXGGXXKXXPPGAP 461
GG G G PPP GG PP P
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 658 PPPXGXXAPPPP 623
PP G APPPP
Sbjct: 782 PPRGGPGAPPPP 793
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPP 545
P P PGG PP G G PP PPP
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 433 GPXKTXXXXXGPPGXXXXXXPRGXGGGXXSPPXKXPPP 546
GP PPG P G G PP PPP
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -1
Query: 526 GGKXPPPPXXGGXXKXXPPG--APPXXXGFXGG 434
GG+ P P GG PPG PP G GG
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Score = 24.6 bits (51), Expect(2) = 4.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 550 GGGGGXFXGGKXPPPPXXGGXXKXXPPGAP 461
GG G G PPP GG PP P
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 658 PPPXGXXAPPPP 623
PP G APPPP
Sbjct: 782 PPRGGPGAPPPP 793
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 463 GPPGXXXXXXPRGXGGGXXSPPXKXPPPPP 552
GPPG P G G SP PP PP
Sbjct: 160 GPPGPDGPAGPAGPDGEAGSPAAPSPPGPP 189
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPP 545
P P PGG PP G G PP PPP
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 433 GPXKTXXXXXGPPGXXXXXXPRGXGGGXXSPPXKXPPP 546
GP PPG P G G PP PPP
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -1
Query: 526 GGKXPPPPXXGGXXKXXPPG--APPXXXGFXGG 434
GG+ P P GG PPG PP G GG
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Score = 24.6 bits (51), Expect(2) = 4.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 550 GGGGGXFXGGKXPPPPXXGGXXKXXPPGAP 461
GG G G PPP GG PP P
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 658 PPPXGXXAPPPP 623
PP G APPPP
Sbjct: 782 PPRGGPGAPPPP 793
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPP 545
P P PGG PP G G PP PPP
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 433 GPXKTXXXXXGPPGXXXXXXPRGXGGGXXSPPXKXPPP 546
GP PPG P G G PP PPP
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPP 799
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -1
Query: 526 GGKXPPPPXXGGXXKXXPPG--APPXXXGFXGG 434
GG+ P P GG PPG PP G GG
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Score = 24.6 bits (51), Expect(2) = 4.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 550 GGGGGXFXGGKXPPPPXXGGXXKXXPPGAP 461
GG G G PPP GG PP P
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 658 PPPXGXXAPPPP 623
PP G APPPP
Sbjct: 782 PPRGGPGAPPPP 793
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = +3
Query: 438 PKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPPXKXXXXXXXXXXXXXXXXXXXX 617
P P GAPGG PP G P P P +
Sbjct: 263 PPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGNDGTPGTDAAYCPCP 322
Query: 618 GXGGGGAXXPXG 653
G GGGG G
Sbjct: 323 GRGGGGGGYGAG 334
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 514 PPPPXXGGXXKXXPPGAPPXXXG 446
PPPP GG + PP PP G
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAG 64
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = -1
Query: 550 GGGGGXFXGGKX--PPPPXXGGXXKXXPPGAPPXXXG 446
GGGGG PPPP G PP PP G
Sbjct: 27 GGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPPMCG 63
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +3
Query: 462 GAPGGXXFXXP-PXXGGGGXFPPXKXPPPP 548
G+ GG P P GG G F P PPPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +3
Query: 462 GAPGGXXFXXP-PXXGGGGXFPPXKXPPPP 548
G+ GG P P GG G F P PPPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +3
Query: 435 PPKNPXXXGGAPGGXXFXXPP--XXGGGGXFPPXKXPPPP 548
PP N GG GG GG G FPP PPPP
Sbjct: 181 PPSNDFGPGGGGGGMGGGGGSGGSGGGSGRFPP---PPPP 217
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 25.4 bits (53), Expect(2) = 4.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 658 PPPXGXXAPPPP 623
PPP G +PPPP
Sbjct: 129 PPPKGTGSPPPP 140
Score = 25.4 bits (53), Expect(2) = 5.8
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 658 PPPXGXXAPPPP 623
PPP G +PPPP
Sbjct: 160 PPPKGTGSPPPP 171
Score = 25.0 bits (52), Expect(2) = 5.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 658 PPPXGXXAPPPP 623
PPP G PPPP
Sbjct: 35 PPPKGTGTPPPP 46
Score = 25.0 bits (52), Expect(2) = 4.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 658 PPPXGXXAPPPP 623
PPP G PPPP
Sbjct: 66 PPPKGTGTPPPP 77
Score = 25.0 bits (52), Expect(2) = 4.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 658 PPPXGXXAPPPP 623
PPP G PPPP
Sbjct: 98 PPPKGTGTPPPP 109
Score = 25.0 bits (52), Expect(2) = 4.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 658 PPPXGXXAPPPP 623
PPP G PPPP
Sbjct: 191 PPPKGTGTPPPP 202
Score = 22.6 bits (46), Expect(2) = 4.4
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1
Query: 520 KXPPPPXXGGXXKXXPPGAPPXXXG 446
+ PPPP G P G P G
Sbjct: 95 RPPPPPKGTGTPPPPPTGEPQDLSG 119
Score = 22.6 bits (46), Expect(2) = 4.4
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1
Query: 520 KXPPPPXXGGXXKXXPPGAPPXXXG 446
+ PPPP G P G P G
Sbjct: 126 RPPPPPKGTGSPPPPPTGEPQDLSG 150
Score = 22.6 bits (46), Expect(2) = 4.4
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1
Query: 520 KXPPPPXXGGXXKXXPPGAPPXXXG 446
+ PPPP G P G P G
Sbjct: 219 RPPPPPKGTGSPTPPPTGEPQDLSG 243
Score = 22.2 bits (45), Expect(2) = 5.8
Identities = 9/27 (33%), Positives = 10/27 (37%)
Frame = -1
Query: 538 GXFXGGKXPPPPXXGGXXKXXPPGAPP 458
G + PPPP G PP P
Sbjct: 56 GEGNASRRPPPPPKGTGTPPPPPTGEP 82
Score = 22.2 bits (45), Expect(2) = 4.4
Identities = 9/27 (33%), Positives = 10/27 (37%)
Frame = -1
Query: 538 GXFXGGKXPPPPXXGGXXKXXPPGAPP 458
G + PPPP G PP P
Sbjct: 150 GEGNASRRPPPPPKGTGSPPPPPTGEP 176
Score = 21.8 bits (44), Expect(2) = 5.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = -1
Query: 520 KXPPPPXXGGXXKXXPPGAPP 458
+ PPPP G PP P
Sbjct: 187 RRPPPPPKGTGTPPPPPTGEP 207
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -1
Query: 550 GGGGGXFXGGKXPPPPXXGG-XXKXXPPGAP 461
GGGGG G P PP GG K PG P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKP 122
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -1
Query: 550 GGGGGXFXGGKXPPPPXXGG-XXKXXPPGAP 461
GGGGG G P PP GG K PG P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKP 122
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -1
Query: 550 GGGGGXFXGGKXPPPPXXGG-XXKXXPPGAP 461
GGGGG G P PP GG K PG P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKP 122
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -1
Query: 550 GGGGGXFXGGKXPPPPXXGG-XXKXXPPGAP 461
GGGGG G P PP GG K PG P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKP 122
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Frame = +3
Query: 435 PPKNPXXXG--GAP-GGXXFXXPPXXGGGGXF--PPXKXPP---PPP 551
PP P G G P GG PP GG G + PP PP PPP
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 28.7 bits (61), Expect = 6.3
Identities = 24/85 (28%), Positives = 25/85 (29%), Gaps = 10/85 (11%)
Frame = +3
Query: 435 PPKNPXXXG------GAPGGXXFXXPPXXGGGGXFPPXKXPP----PPPXKXXXXXXXXX 584
PP+ P G GAP F P GG PP P PPP
Sbjct: 334 PPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPP 393
Query: 585 XXXXXXXXXXXGXGGGGAXXPXGGG 659
G GG G P G G
Sbjct: 394 PSAFGAPQGPGGPGGYGPPPPGGPG 418
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 438 PKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPP 548
P P G P G P GG +PP PPPP
Sbjct: 322 PPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 438 PKNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPP 548
P P G P G P GG +PP PPPP
Sbjct: 322 PPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 441 KNPXXXGGAPGGXXFXXPPXXGGGGXFPPXKXPPPPP 551
+NP G GG P GGGG P PPP
Sbjct: 174 QNPESSGYTSGGSGGPGGPGSGGGGGGPGGYPSAPPP 210
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = +3
Query: 462 GAPGGXXFXXPPXXGGGGXFPPX----KXPPPPP 551
GAPGG PP GG PP + PPPPP
Sbjct: 802 GAPGGPR---PPYPYPGGPVPPGPPQNRMPPPPP 832
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 505 GGGXXSPPXKXPPPPP 552
GGG PP PPPPP
Sbjct: 23 GGGKGRPPPARPPPPP 38
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 504 GGGGXFPPXKXPPPPPXK 557
GG G PP + PPPPP +
Sbjct: 24 GGKGRPPPARPPPPPPPR 41
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.3
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 7/82 (8%)
Frame = -1
Query: 658 PPPXGXXAPP-PPXPXXXXXXXXXXXXXXXXXXXXFXGGGGGXFXGGKXPPPP----XXG 494
PPP G PP PP GG G PP P G
Sbjct: 210 PPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSG 269
Query: 493 GXXKXXPPG--APPXXXGFXGG 434
G + PPG PP G GG
Sbjct: 270 GAAQPGPPGPPGPPGNDGQPGG 291
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 550 GGGGGXFXGGKXPPPPXXGGXXKXXPPGAP 461
G GG GG PPP GG PG P
Sbjct: 188 GQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 217
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 550 GGGGGXFXGGKXPPPPXXGGXXKXXPPGAP 461
G GG GG PPP GG PG P
Sbjct: 468 GQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 497
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 459 GGAPGGXXFXXPPXXGGGGXFPPXKXPPPPPXK 557
GG GG P GGGG PP PP K
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAK 651
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +3
Query: 435 PPKNPXXXGG-APGGXXFXXPPXX--GGGGXFPPXKXPPPPP 551
PP P GG AP PP G PP PPPPP
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 459 GGAPGGXXFXXPPXXGGGGXFPPXKXPPPPPXK 557
GG GG P GGGG PP PP K
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAK 651
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +3
Query: 435 PPKNPXXXGG-APGGXXFXXPPXX--GGGGXFPPXKXPPPPP 551
PP P GG AP PP G PP PPPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +3
Query: 435 PPKNPXXXGG-APGGXXFXXPPXX--GGGGXFPPXKXPPPPP 551
PP P GG AP PP G PP PPPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,027,651
Number of Sequences: 27780
Number of extensions: 188454
Number of successful extensions: 3161
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2418
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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