Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_L21
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0741 - 24016204-24016298,24016408-24016525,24016805-240169...    30   2.2  
01_06_0461 + 29553709-29554905,29555051-29555296,29555387-295554...    30   2.2  
04_03_0513 - 16681227-16683936,16685572-16685966                       29   3.8  

>06_03_0741 -
           24016204-24016298,24016408-24016525,24016805-24016903,
           24016992-24017117,24017200-24017277,24017366-24017554,
           24018186-24018338,24018785-24018898,24019576-24019761,
           24019845-24019970,24020053-24020248,24020338-24020438,
           24020533-24020610,24020707-24020952,24021063-24022253
          Length = 1031

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 762 HLQLSKQFCLRCWGKXRGIGIVGVHYELFVFFDNSVIIT 646
           HL L K FC+   G   G+G +GV   L  F  +  +IT
Sbjct: 761 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVIT 799


>01_06_0461 +
           29553709-29554905,29555051-29555296,29555387-29555464,
           29555557-29555657,29555745-29555940,29556022-29556147,
           29556231-29556416,29556921-29557034,29557522-29557674,
           29558287-29558475,29558568-29558645,29558728-29558853,
           29558942-29559040,29559315-29559432,29559531-29559625
          Length = 1033

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 762 HLQLSKQFCLRCWGKXRGIGIVGVHYELFVFFDNSVIIT 646
           HL L K FC+   G   G+G +GV   L  F  +  +IT
Sbjct: 763 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVIT 801


>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 269  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 367
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,567,178
Number of Sequences: 37544
Number of extensions: 390865
Number of successful extensions: 826
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)