Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_L18
(939 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.003
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.003
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.006
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.006
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.006
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.024
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.024
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.024
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 35 0.097
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.39
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 33 0.39
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 33 0.39
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.68
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 31 1.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.6
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.6
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 30 2.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.1
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 30 2.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 2.7
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 2.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 2.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 2.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.7
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 2.7
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.6
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 29 3.6
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 29 3.6
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 29 3.6
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.8
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 4.8
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 4.8
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 29 4.8
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 4.8
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 4.8
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 4.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.8
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 29 6.3
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 28 8.4
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/81 (29%), Positives = 28/81 (34%)
Frame = +2
Query: 677 PPHXXGGQTPXXXXKIPXFXPXKPPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPPXX 856
PP G+TP P PP P F + P P P G PPP
Sbjct: 299 PPPPPPGRTPGP----PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
Query: 857 FSXSGXWXXPPXPGVXXPKPP 919
+ +G PP P P PP
Sbjct: 355 YPSAGPGMYPPPPPSRPPAPP 375
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/80 (28%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Frame = +3
Query: 705 PRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFP--LGEXG-GXXXNPPPXGFPXPXX 875
P S PP PP P + G+ P P G G G PPP G P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 876 GXXPPXRGLXXQNPPVXPRP 935
PP P + P P
Sbjct: 347 MPPPPPPRYPSAGPGMYPPP 366
Score = 31.9 bits (69), Expect = 0.68
Identities = 37/149 (24%), Positives = 41/149 (27%), Gaps = 4/149 (2%)
Frame = +1
Query: 415 PPPGXXGLVFGXXSRSPPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKGPX 594
PPP G + PP P P + PP G P G P
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPG-MTPRPPPPPSSGMWPPPPPPP 303
Query: 595 KXXNPKKGXLXGFFPXAPP----PXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPP 762
P + G P PP P PP P G P P P
Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP--PPRYPSAGPG 361
Query: 763 LXPXPXX*PESXPPFSPLGXXGAXXXTPP 849
+ P P P S PP P G PP
Sbjct: 362 MYPPP---PPSRPPAPPSGHGMIPPPPPP 387
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +2
Query: 746 PPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPPXXFSXSGXWXXPPXPGV-XXPKPP 919
PP P P V P P PP P PPP SG W PP P P PP
Sbjct: 261 PPVPP---PPPSVTPMPPP-MPPTPGMTPRPPPPPS----SGMWPPPPPPPPGRTPGPP 311
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/81 (29%), Positives = 28/81 (34%)
Frame = +2
Query: 677 PPHXXGGQTPXXXXKIPXFXPXKPPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPPXX 856
PP G+TP P PP P F + P P P G PPP
Sbjct: 309 PPPPPPGRTPGP----PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
Query: 857 FSXSGXWXXPPXPGVXXPKPP 919
+ +G PP P P PP
Sbjct: 365 YPSAGPGMYPPPPPSRPPAPP 385
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/80 (28%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Frame = +3
Query: 705 PRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFP--LGEXG-GXXXNPPPXGFPXPXX 875
P S PP PP P + G+ P P G G G PPP G P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 876 GXXPPXRGLXXQNPPVXPRP 935
PP P + P P
Sbjct: 357 MPPPPPPRYPSAGPGMYPPP 376
Score = 31.9 bits (69), Expect = 0.68
Identities = 37/149 (24%), Positives = 41/149 (27%), Gaps = 4/149 (2%)
Frame = +1
Query: 415 PPPGXXGLVFGXXSRSPPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKGPX 594
PPP G + PP P P + PP G P G P
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPG-MTPRPPPPPSSGMWPPPPPPP 313
Query: 595 KXXNPKKGXLXGFFPXAPP----PXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPP 762
P + G P PP P PP P G P P P
Sbjct: 314 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP--PPRYPSAGPG 371
Query: 763 LXPXPXX*PESXPPFSPLGXXGAXXXTPP 849
+ P P P S PP P G PP
Sbjct: 372 MYPPP---PPSRPPAPPSGHGMIPPPPPP 397
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +2
Query: 746 PPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPPXXFSXSGXWXXPPXPGV-XXPKPP 919
PP P P V P P PP P PPP SG W PP P P PP
Sbjct: 271 PPVPP---PPPSVTPMPPP-MPPTPGMTPRPPPPPS----SGMWPPPPPPPPGRTPGPP 321
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/81 (30%), Positives = 27/81 (33%)
Frame = +2
Query: 677 PPHXXGGQTPXXXXKIPXFXPXKPPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPPXX 856
PP G P +P PP P P P PP G P PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 857 FSXSGXWXXPPXPGVXXPKPP 919
F G PP PG+ P P
Sbjct: 780 FK--GGPPPPPPPGMFAPMAP 798
Score = 35.1 bits (77), Expect = 0.073
Identities = 32/95 (33%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Frame = +3
Query: 666 SQNXPXIXXGGKPPRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFPLGEX----GGX 833
S P I G PP PP PP P P +TG P P G GG
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPP--PPPPPGGLPP--ITGGPPPPPPPGGLPPISGGP 758
Query: 834 XXNPPPXGFPXPXXGXXPPXRGLXXQNPPVXPRPG 938
PPP G P PP G PP P PG
Sbjct: 759 PPPPPPPGGCPPP--PPPPPPGGFKGGPPPPPPPG 791
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/81 (33%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +1
Query: 415 PPPGXXGLVFGXXSRSPPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKG-P 591
PPPG + G PP L P G PPP GG P G P G P
Sbjct: 715 PPPGLPPIT-GGPPPPPPPGGLPP--ITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCP 769
Query: 592 XKXXNPKKGXLXGFFPXAPPP 654
P G G P PPP
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/86 (29%), Positives = 25/86 (29%)
Frame = +3
Query: 678 PXIXXGGKPPRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPPXG 857
P GG PP P P G L P GG PPP G
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPI-----TGGPPPPPPPGG 750
Query: 858 FPXPXXGXXPPXRGLXXQNPPVXPRP 935
P P G PP PP P P
Sbjct: 751 LP-PISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/75 (30%), Positives = 25/75 (33%)
Frame = +1
Query: 637 PXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPPFSPL 816
P PPP L P G P P P + PP P P P PP P
Sbjct: 726 PPPPPPPGGL----PPITGGPPPPPP---PGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Query: 817 GXXGAXXXTPPXXVF 861
G G PP +F
Sbjct: 779 GFKGGPPPPPPPGMF 793
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +1
Query: 415 PPPGXXGLVFGXXSRSPPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPG 567
PPP GL S PP P PG PPP GG + P PG
Sbjct: 744 PPPPPGGLP--PISGGPPPPPPPPG-GCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Frame = +2
Query: 746 PPXXPLXFPTXXVNRNPXPXFPPWGXX----GPFXXPPPXXFSX-SGXWXXPPXPGVXXP 910
PP P P + P P PP G GP PPP SG PP P P
Sbjct: 713 PPPPPGLPP---ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 911 KPPRXXP 931
PP P
Sbjct: 770 PPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/81 (30%), Positives = 27/81 (33%)
Frame = +2
Query: 677 PPHXXGGQTPXXXXKIPXFXPXKPPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPPXX 856
PP G P +P PP P P P PP G P PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 857 FSXSGXWXXPPXPGVXXPKPP 919
F G PP PG+ P P
Sbjct: 780 FK--GGPPPPPPPGMFAPMAP 798
Score = 35.1 bits (77), Expect = 0.073
Identities = 32/95 (33%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Frame = +3
Query: 666 SQNXPXIXXGGKPPRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFPLGEX----GGX 833
S P I G PP PP PP P P +TG P P G GG
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPP--PPPPPGGLPP--ITGGPPPPPPPGGLPPISGGP 758
Query: 834 XXNPPPXGFPXPXXGXXPPXRGLXXQNPPVXPRPG 938
PPP G P PP G PP P PG
Sbjct: 759 PPPPPPPGGCPPP--PPPPPPGGFKGGPPPPPPPG 791
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/81 (33%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +1
Query: 415 PPPGXXGLVFGXXSRSPPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKG-P 591
PPPG + G PP L P G PPP GG P G P G P
Sbjct: 715 PPPGLPPIT-GGPPPPPPPGGLPP--ITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCP 769
Query: 592 XKXXNPKKGXLXGFFPXAPPP 654
P G G P PPP
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/86 (29%), Positives = 25/86 (29%)
Frame = +3
Query: 678 PXIXXGGKPPRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPPXG 857
P GG PP P P G L P GG PPP G
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPI-----TGGPPPPPPPGG 750
Query: 858 FPXPXXGXXPPXRGLXXQNPPVXPRP 935
P P G PP PP P P
Sbjct: 751 LP-PISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/75 (30%), Positives = 25/75 (33%)
Frame = +1
Query: 637 PXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPPFSPL 816
P PPP L P G P P P + PP P P P PP P
Sbjct: 726 PPPPPPPGGL----PPITGGPPPPPP---PGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Query: 817 GXXGAXXXTPPXXVF 861
G G PP +F
Sbjct: 779 GFKGGPPPPPPPGMF 793
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +1
Query: 415 PPPGXXGLVFGXXSRSPPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPG 567
PPP GL S PP P PG PPP GG + P PG
Sbjct: 744 PPPPPGGLP--PISGGPPPPPPPPG-GCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Frame = +2
Query: 746 PPXXPLXFPTXXVNRNPXPXFPPWGXX----GPFXXPPPXXFSX-SGXWXXPPXPGVXXP 910
PP P P + P P PP G GP PPP SG PP P P
Sbjct: 713 PPPPPGLPP---ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 911 KPPRXXP 931
PP P
Sbjct: 770 PPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/81 (30%), Positives = 27/81 (33%)
Frame = +2
Query: 677 PPHXXGGQTPXXXXKIPXFXPXKPPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPPXX 856
PP G P +P PP P P P PP G P PPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Query: 857 FSXSGXWXXPPXPGVXXPKPP 919
F G PP PG+ P P
Sbjct: 363 FK--GGPPPPPPPGMFAPMAP 381
Score = 35.1 bits (77), Expect = 0.073
Identities = 32/95 (33%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Frame = +3
Query: 666 SQNXPXIXXGGKPPRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFPLGEX----GGX 833
S P I G PP PP PP P P +TG P P G GG
Sbjct: 286 SSALPPITGGPPPPPGLPPITGGPP--PPPPPGGLPP--ITGGPPPPPPPGGLPPISGGP 341
Query: 834 XXNPPPXGFPXPXXGXXPPXRGLXXQNPPVXPRPG 938
PPP G P PP G PP P PG
Sbjct: 342 PPPPPPPGGCPPP--PPPPPPGGFKGGPPPPPPPG 374
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/81 (33%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +1
Query: 415 PPPGXXGLVFGXXSRSPPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKG-P 591
PPPG + G PP L P G PPP GG P G P G P
Sbjct: 298 PPPGLPPIT-GGPPPPPPPGGLPP--ITGGPPPPPPPGG--LPPISGGPPPPPPPPGGCP 352
Query: 592 XKXXNPKKGXLXGFFPXAPPP 654
P G G P PPP
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPP 373
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/86 (29%), Positives = 25/86 (29%)
Frame = +3
Query: 678 PXIXXGGKPPRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPPXG 857
P GG PP P P G L P GG PPP G
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPI-----TGGPPPPPPPGG 333
Query: 858 FPXPXXGXXPPXRGLXXQNPPVXPRP 935
P P G PP PP P P
Sbjct: 334 LP-PISGGPPPPPPPPGGCPPPPPPP 358
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/75 (30%), Positives = 25/75 (33%)
Frame = +1
Query: 637 PXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPPFSPL 816
P PPP L P G P P P + PP P P P PP P
Sbjct: 309 PPPPPPPGGL----PPITGGPPPPPP---PGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Query: 817 GXXGAXXXTPPXXVF 861
G G PP +F
Sbjct: 362 GFKGGPPPPPPPGMF 376
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +1
Query: 415 PPPGXXGLVFGXXSRSPPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPG 567
PPP GL S PP P PG PPP GG + P PG
Sbjct: 327 PPPPPGGLP--PISGGPPPPPPPPG-GCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Frame = +2
Query: 746 PPXXPLXFPTXXVNRNPXPXFPPWGXX----GPFXXPPPXXFSX-SGXWXXPPXPGVXXP 910
PP P P + P P PP G GP PPP SG PP P P
Sbjct: 296 PPPPPGLPP---ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Query: 911 KPPRXXP 931
PP P
Sbjct: 353 PPPPPPP 359
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.7 bits (81), Expect = 0.024
Identities = 28/116 (24%), Positives = 33/116 (28%), Gaps = 2/116 (1%)
Frame = +1
Query: 463 PPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKGPXKXXNPKKGXLXGFFPX 642
PP +P L PPP G P+ G P + P G P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 643 APPPXN--XLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPP 804
PPP PP G+ P +P P P P P PP
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 355
Score = 36.3 bits (80), Expect = 0.032
Identities = 30/93 (32%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Frame = +3
Query: 678 PXIXXGGKPPRXXXKSXXXPPX--NPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPP 851
P + G PP PP +PP P+ S P G SP P G PPP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG-SPPPP--RAGSPPPPPPP 303
Query: 852 XG------FPXPXXGXXPPXRGLXXQNPPVXPR 932
G P P G PP G +PP PR
Sbjct: 304 RGSPPTGSLPPPQAGGSPPPAGTG--SPPPPPR 334
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 637 PXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPL--XPXPXX*PESXPPFS 810
P PP PP G+ P +P P +P PP P P PP
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Query: 811 PLGXXGAXXXTPP 849
P G PP
Sbjct: 303 PRGSPPTGSLPPP 315
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Frame = +3
Query: 702 PPRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPPXGF-PXPXXG 878
PP P +PP A S S P P G PPP G P P G
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-----PPPTGSPPPPPAG 286
Query: 879 XXPPXRGLXXQNPPVXPR 932
PP PP PR
Sbjct: 287 GSPPPPRAGSPPPPPPPR 304
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.7 bits (81), Expect = 0.024
Identities = 28/116 (24%), Positives = 33/116 (28%), Gaps = 2/116 (1%)
Frame = +1
Query: 463 PPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKGPXKXXNPKKGXLXGFFPX 642
PP +P L PPP G P+ G P + P G P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 643 APPPXN--XLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPP 804
PPP PP G+ P +P P P P P PP
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 376
Score = 36.3 bits (80), Expect = 0.032
Identities = 30/93 (32%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Frame = +3
Query: 678 PXIXXGGKPPRXXXKSXXXPPX--NPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPP 851
P + G PP PP +PP P+ S P G SP P G PPP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG-SPPPP--RAGSPPPPPPP 324
Query: 852 XG------FPXPXXGXXPPXRGLXXQNPPVXPR 932
G P P G PP G +PP PR
Sbjct: 325 RGSPPTGSLPPPQAGGSPPPAGTG--SPPPPPR 355
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 637 PXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPL--XPXPXX*PESXPPFS 810
P PP PP G+ P +P P +P PP P P PP
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Query: 811 PLGXXGAXXXTPP 849
P G PP
Sbjct: 324 PRGSPPTGSLPPP 336
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Frame = +3
Query: 702 PPRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPPXGF-PXPXXG 878
PP P +PP A S S P P G PPP G P P G
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-----PPPTGSPPPPPAG 307
Query: 879 XXPPXRGLXXQNPPVXPR 932
PP PP PR
Sbjct: 308 GSPPPPRAGSPPPPPPPR 325
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.024
Identities = 28/116 (24%), Positives = 33/116 (28%), Gaps = 2/116 (1%)
Frame = +1
Query: 463 PPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKGPXKXXNPKKGXLXGFFPX 642
PP +P L PPP G P+ G P + P G P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 643 APPPXN--XLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPP 804
PPP PP G+ P +P P P P P PP
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 361
Score = 36.3 bits (80), Expect = 0.032
Identities = 30/93 (32%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Frame = +3
Query: 678 PXIXXGGKPPRXXXKSXXXPPX--NPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPP 851
P + G PP PP +PP P+ S P G SP P G PPP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG-SPPPP--RAGSPPPPPPP 309
Query: 852 XG------FPXPXXGXXPPXRGLXXQNPPVXPR 932
G P P G PP G +PP PR
Sbjct: 310 RGSPPTGSLPPPQAGGSPPPAGTG--SPPPPPR 340
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +1
Query: 637 PXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPL--XPXPXX*PESXPPFS 810
P PP PP G+ P +P P +P PP P P PP
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Query: 811 PLGXXGAXXXTPP 849
P G PP
Sbjct: 309 PRGSPPTGSLPPP 321
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Frame = +3
Query: 702 PPRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPPXGF-PXPXXG 878
PP P +PP A S S P P G PPP G P P G
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-----PPPTGSPPPPPAG 292
Query: 879 XXPPXRGLXXQNPPVXPR 932
PP PP PR
Sbjct: 293 GSPPPPRAGSPPPPPPPR 310
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 34.7 bits (76), Expect = 0.097
Identities = 21/75 (28%), Positives = 23/75 (30%)
Frame = +1
Query: 589 PXKXXNPKKGXLXGFFPXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLX 768
P P+K G P PPP PP P +P P TP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 769 PXPXX*PESXPPFSP 813
P P PP P
Sbjct: 182 NPPRTPPSPIPPPPP 196
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +2
Query: 746 PPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPPXXFSXSGXWXXPPXPGVXXPKPPR 922
PP P P R+P P PP P PP S P P PPR
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPR 197
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/68 (35%), Positives = 26/68 (38%)
Frame = +3
Query: 735 PPXNPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPPXGFPXPXXGXXPPXRGLXXQN 914
PP PP PS P T P P+ G NPPP P P G P +
Sbjct: 470 PP--PPGPPSSLLPLINTNAPPPP-PMPSINGHAPNPPP---PPPLLGIAP----MSTNA 519
Query: 915 PPVXPRPG 938
PP P PG
Sbjct: 520 PPPPPMPG 527
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 32.7 bits (71), Expect = 0.39
Identities = 39/157 (24%), Positives = 42/157 (26%)
Frame = +1
Query: 466 PHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKGPXKXXNPKKGXLXGFFPXA 645
P AP L P P G K PGK P P K + P
Sbjct: 88 PEVNPAPNLQCEGCCLPGPPGPAGAPGK----PGKPGRPGAPGTPGTPGKPPVAPCEPTT 143
Query: 646 PPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPPFSPLGXX 825
PPP + PP P G +P TP P P PP P G
Sbjct: 144 PPPCKPCPQGPP---GPPGPPGAPGDP--GEAGTPGRPGTDAAPGSPGPRGPP-GPAGEA 197
Query: 826 GAXXXTPPXXVFXXXXXXXXXXXGGXXAKTPPFXPGP 936
GA G PP PGP
Sbjct: 198 GAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGP 234
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 32.7 bits (71), Expect = 0.39
Identities = 39/157 (24%), Positives = 42/157 (26%)
Frame = +1
Query: 466 PHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKGPXKXXNPKKGXLXGFFPXA 645
P AP L P P G K PGK P P K + P
Sbjct: 83 PEVNPAPNLQCEGCCLPGPPGPAGAPGK----PGKPGRPGAPGTPGTPGKPPVAPCEPTT 138
Query: 646 PPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPPFSPLGXX 825
PPP + PP P G +P TP P P PP P G
Sbjct: 139 PPPCKPCPQGPP---GPPGPPGAPGDP--GEAGTPGRPGTDAAPGSPGPRGPP-GPAGEA 192
Query: 826 GAXXXTPPXXVFXXXXXXXXXXXGGXXAKTPPFXPGP 936
GA G PP PGP
Sbjct: 193 GAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGP 229
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 32.7 bits (71), Expect = 0.39
Identities = 39/157 (24%), Positives = 42/157 (26%)
Frame = +1
Query: 466 PHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGKXXXTKGPXKXXNPKKGXLXGFFPXA 645
P AP L P P G K PGK P P K + P
Sbjct: 83 PEVNPAPNLQCEGCCLPGPPGPAGAPGK----PGKPGRPGAPGTPGTPGKPPVAPCEPTT 138
Query: 646 PPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPPFSPLGXX 825
PPP + PP P G +P TP P P PP P G
Sbjct: 139 PPPCKPCPQGPP---GPPGPPGAPGDP--GEAGTPGRPGTDAAPGSPGPRGPP-GPAGEA 192
Query: 826 GAXXXTPPXXVFXXXXXXXXXXXGGXXAKTPPFXPGP 936
GA G PP PGP
Sbjct: 193 GAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGP 229
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.68
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 810 PLGEXGGXXXNPPPXGFPXPXXGXXPPXRG 899
PLG G PPP G P G PP RG
Sbjct: 1458 PLGMMRGRGGPPPPRGMNSPMRGMPPPMRG 1487
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +1
Query: 637 PXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPP 804
P PPP + L PP P K P PL P PPL P PP
Sbjct: 1343 PPPPPPSDDLTPVPPP---PPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +2
Query: 770 PTXXVNRNPXPXFPPWGXXGPFXXPPPXX----FSXSGXWXXPPXPGVXXPKPPRXXP 931
P +RN P PP+G P+ PPP + W PP P P+P + P
Sbjct: 40 PPPPWHRNRGP--PPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEPEPQQDQP 95
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/87 (26%), Positives = 25/87 (28%)
Frame = +3
Query: 678 PXIXXGGKPPRXXXKSXXXPPXNPPXAPSXSXPXXLTGILSPXFPLGEXGGXXXNPPPXG 857
P G PP PP + + P G P G G PPP G
Sbjct: 361 PQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGA-----PQGPGGPGGYGPPPPG 415
Query: 858 FPXPXXGXXPPXRGLXXQNPPVXPRPG 938
P PP G PP PG
Sbjct: 416 GPGAPGSYGPPQGGPGGFGPPPPGGPG 442
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -3
Query: 934 GRGXTGGFWXXNPRXGGXXPXXGXGKPXGGGXXKXPPXSPRGK 806
G G GG+ GG P G G GGG P RGK
Sbjct: 216 GGGGDGGYGPSGGYGGGYGPGGGYGMGGGGGGGGCPNGECRGK 258
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/84 (26%), Positives = 26/84 (30%)
Frame = +1
Query: 562 PGKXXXTKGPXKXXNPKKGXLXGFFPXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPL 741
PG+ P NP + P PPP + PP P G P L
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 742 XTPXXPPLXPXPXX*PESXPPFSP 813
P P P P PP +P
Sbjct: 174 PGQDAAPGEPGPKGPP--GPPGAP 195
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.3 bits (65), Expect = 2.1
Identities = 31/111 (27%), Positives = 34/111 (30%)
Frame = +1
Query: 517 PPXGGXRXXPKXGXXPGKXXXTKGPXKXXNPKKGXLXGFFPXAPPPXNXLXKXPPXFXXG 696
P G P PGK P NP + P PPP + PP
Sbjct: 94 PGAQGPPGTPGSAGRPGKPG---APGLNGNPGRPPKEPCEPLTPPPCKPCPEGPP---GP 147
Query: 697 ANPXGXXKNPXLXPLXTPXXPPLXPXPXX*PESXPPFSPLGXXGAXXXTPP 849
A P G N PL P PP P P + P P G G P
Sbjct: 148 AGPPGPDGNK--GPLG-PPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGP 195
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/84 (26%), Positives = 26/84 (30%)
Frame = +1
Query: 562 PGKXXXTKGPXKXXNPKKGXLXGFFPXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPL 741
PG+ P NP + P PPP + PP P G P L
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 742 XTPXXPPLXPXPXX*PESXPPFSP 813
P P P P PP +P
Sbjct: 174 PGQDAAPGEPGPKGPP--GPPGAP 195
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/92 (30%), Positives = 28/92 (30%), Gaps = 2/92 (2%)
Frame = +1
Query: 562 PGKXXXTKGPXKXXNPKKGXLXGFFPXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPL 741
PGK P NP KG P PP PP A P G P
Sbjct: 116 PGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPP-----GPD 170
Query: 742 XTPXXP--PLXPXPXX*PESXPPFSPLGXXGA 831
P P P P P P P P G GA
Sbjct: 171 GNPGSPAGPSGPGPAGPP---GPAGPAGNDGA 199
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/92 (30%), Positives = 28/92 (30%), Gaps = 2/92 (2%)
Frame = +1
Query: 562 PGKXXXTKGPXKXXNPKKGXLXGFFPXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPL 741
PGK P NP KG P PP PP A P G P
Sbjct: 116 PGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPP-----GPD 170
Query: 742 XTPXXP--PLXPXPXX*PESXPPFSPLGXXGA 831
P P P P P P P P G GA
Sbjct: 171 GNPGSPAGPSGPGPAGPP---GPAGPAGNDGA 199
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +2
Query: 737 PXKPPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXP-PPXXFSXSGXWXXPPXPGVXXPK 913
P KPP P PT P P PP G GP P P G PG+ P+
Sbjct: 133 PGKPPTAPCE-PTTPPPCKPCPQGPP-GPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPR 190
Query: 914 PPRXXP 931
P P
Sbjct: 191 GPPGPP 196
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/92 (30%), Positives = 28/92 (30%), Gaps = 2/92 (2%)
Frame = +1
Query: 562 PGKXXXTKGPXKXXNPKKGXLXGFFPXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPL 741
PGK P NP KG P PP PP A P G P
Sbjct: 116 PGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPP-----GPD 170
Query: 742 XTPXXP--PLXPXPXX*PESXPPFSPLGXXGA 831
P P P P P P P P G GA
Sbjct: 171 GNPGSPAGPSGPGPAGPP---GPAGPAGNDGA 199
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/92 (30%), Positives = 28/92 (30%), Gaps = 2/92 (2%)
Frame = +1
Query: 562 PGKXXXTKGPXKXXNPKKGXLXGFFPXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPL 741
PGK P NP KG P PP PP A P G P
Sbjct: 116 PGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPP-----GPD 170
Query: 742 XTPXXP--PLXPXPXX*PESXPPFSPLGXXGA 831
P P P P P P P P G GA
Sbjct: 171 GNPGSPAGPSGPGPAGPP---GPAGPAGNDGA 199
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 680 PHXXGGQTPXXXXKIPXFXPXKPPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPP 850
PH P IP P PP P P P PP G P PPP
Sbjct: 198 PHAPPPPVPLTS-NIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 680 PHXXGGQTPXXXXKIPXFXPXKPPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPP 850
PH P IP P PP P P P PP G P PPP
Sbjct: 184 PHAPPPPVPLTS-NIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 680 PHXXGGQTPXXXXKIPXFXPXKPPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXPPP 850
PH P IP P PP P P P PP G P PPP
Sbjct: 184 PHAPPPPVPLTS-NIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 239
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +2
Query: 737 PXKPPXXPLXFPTXXVNRNPXPXFPPWGXXGPFXXP-PPXXFSXSGXWXXPPXPGVXXPK 913
P KPP P PT P P PP G GP P P G PG+ P+
Sbjct: 133 PGKPPTAPCE-PTTPPPCKPCPQGPP-GPPGPPGAPGDPGEAGTPGRPGTDATPGLPGPR 190
Query: 914 PPRXXP 931
P P
Sbjct: 191 GPPGPP 196
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = -2
Query: 800 GXDSG*XXGXGXRGGXXGVXRGXXXGFXXXPXGFAPXXNXGGILXRXFXGGGAXGKXP 627
G + G G G RGG G RG GF GG+ R GG A G P
Sbjct: 258 GGEGGGRGGRGGRGGFRGGFRGGRGGFGGPGGPMGGRGGMGGMGGRG-RGGQAAGFRP 314
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = -3
Query: 934 GRGXTGGFWXX--NPRXGGXXPXXGXGKPXGGGXXKXPPXSPRGKXGXRIPVNXXGXEXE 761
GRG G F N GG G G GG P P G +
Sbjct: 556 GRGGGGSFGGNFSNYNSGGATGGFGSGPAYGGSFGGGAPRRPFTNGGFGAHSSLSSTSNS 615
Query: 760 GAXGGFXGGKXXDF 719
G GGF G + F
Sbjct: 616 GGGGGFSGPRRGGF 629
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = -3
Query: 934 GRGXTGGFWXX--NPRXGGXXPXXGXGKPXGGGXXKXPPXSPRGKXGXRIPVNXXGXEXE 761
GRG G F N GG G G GG P P G +
Sbjct: 540 GRGGGGSFGGNFSNYNSGGATGGFGSGPAYGGSFGGGAPRRPFTNGGFGAHSSLSSTSNS 599
Query: 760 GAXGGFXGGKXXDF 719
G GGF G + F
Sbjct: 600 GGGGGFSGPRRGGF 613
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/74 (28%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = -3
Query: 934 GRGXTGGFWXX--NPRXGGXXPXXGXGKPXGGGXXKXPPXSPRGKXGXRIPVNXXGXEXE 761
GRG G F N GG G G GG P P G +
Sbjct: 537 GRGGGGSFGGNFSNYNSGGATGGFGSGPAYGGSFGGGAPRRPFTNGGFGAHSSLSSTSNS 596
Query: 760 GAXGGFXGGKXXDF 719
G GGF G + F
Sbjct: 597 GGGGGFSGPRRGGF 610
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +1
Query: 418 PPGXXGLVFGXXSRSPPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGK 570
P G G V G + PP P PG G P GG R P PG+
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGGPGELGG-----PGRGGNRGPPGPRGPPGE 185
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +1
Query: 418 PPGXXGLVFGXXSRSPPHXPLAPGLXXGXXVXPPPXGGXRXXPKXGXXPGK 570
P G G V G + PP P PG G P GG R P PG+
Sbjct: 140 PAGPPGAVGGPGPKGPPGPPGGPGELGG-----PGRGGNRGPPGPRGPPGE 185
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = -2
Query: 812 GEXGGXDSG*XXGXGXRGGXXGVXR-GXXXGFXXXPXGFAPXXNXGGILXRXFXGGGAXG 636
G GG D G G G RGG G R G GF G + GG F GG G
Sbjct: 329 GGRGGFDGGRGGGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDRGGD-RGGFRGGRGVG 387
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/84 (26%), Positives = 27/84 (32%)
Frame = +1
Query: 562 PGKXXXTKGPXKXXNPKKGXLXGFFPXAPPPXNXLXKXPPXFXXGANPXGXXKNPXLXPL 741
PG+ P NP + P PPP + PP P G P L
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 742 XTPXXPPLXPXPXX*PESXPPFSP 813
P P P P+ PP +P
Sbjct: 174 PGQDAAPGEPGPKG-PKG-PPGAP 195
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -1
Query: 861 ENXXGGGXXXGPXXPQGGKXGXGFRLTXXVGXKRGXXGGXQG 736
+N GGG G QGG G GF G GG G
Sbjct: 119 DNYGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGG 160
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 843 PPPXGFPXPXXGXXPPXRGLXXQNPPVXP 929
PPP G P P G PP GL V P
Sbjct: 94 PPPIGMPPPPLGMPPPHIGLGAAPYAVPP 122
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 843 PPPXGFPXPXXGXXPPXRGLXXQNPPVXP 929
PPP G P P G PP GL V P
Sbjct: 117 PPPIGMPPPPLGMPPPHIGLGAAPYAVPP 145
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 843 PPPXGFPXPXXGXXPPXRGLXXQNPPVXP 929
PPP G P P G PP GL V P
Sbjct: 367 PPPIGMPPPPLGMPPPHIGLGAAPYAVPP 395
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/73 (30%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Frame = +2
Query: 725 PXFXPXKPPXXPLXFP----TXXVNRNPXPXFPPWGXXGPFXXPPPXXFSXSGXWXXPPX 892
P P P P+ FP + P P P G F P G PP
Sbjct: 662 PNIQPPVPHPPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPP 721
Query: 893 PGVXXPKPPRXXP 931
PGV P PP+ P
Sbjct: 722 PGV-GPPPPQGIP 733
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 536 RXPPXGGGXTXXPXXRPGARGXWG 465
R P G G T RPGA G WG
Sbjct: 105 RPGPPGAGGTPGKPGRPGAPGAWG 128
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 2/82 (2%)
Frame = +3
Query: 696 GKPPRXXXKSXXXPPXNPPXA--PSXSXPXXLTGILSPXFPLGEXGGXXXNPPPXGFPXP 869
GKPP+ + PP +P A P P G + GE G PP P
Sbjct: 121 GKPPQQPCELVTPPPCSPCPAGPPGKPGPQGAPGDIGQPGNPGERGMDGEPGPPGPTGPP 180
Query: 870 XXGXXPPXRGLXXQNPPVXPRP 935
P +G+ Q P V P
Sbjct: 181 GEPGLPGAQGITGQ-PGVNAEP 201
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = -3
Query: 937 PGR-GXTGGFWXXNPRXG-GXXPXXGXGKPXGGGXXKXPPXSPRGKXGXRIPVNXXGXEX 764
PGR G G PR G G G P G K P PRG G P G E
Sbjct: 210 PGRQGMPGPTGPPGPRGPPGETGDEGEGGPDGIPMEKKSPPGPRGPPGPAGPDGPQGPEG 269
Query: 763 EGAXGGFXG 737
G G
Sbjct: 270 RSGKQGPPG 278
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/55 (34%), Positives = 21/55 (38%)
Frame = -2
Query: 800 GXDSG*XXGXGXRGGXXGVXRGXXXGFXXXPXGFAPXXNXGGILXRXFXGGGAXG 636
G + G G G RGG G RG GF GG+ R GG A G
Sbjct: 258 GGEGGGRGGRGGRGGFRGGFRGGRGGFGGPGGPMGGRGGMGGMGGRG-RGGQAAG 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,481,623
Number of Sequences: 27780
Number of extensions: 288606
Number of successful extensions: 1194
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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