Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_L11
         (907 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039049-3|AAB94251.2|  298|Caenorhabditis elegans Serpentine re...    31   1.5  
AL023856-7|CAA19563.2|  326|Caenorhabditis elegans Hypothetical ...    29   3.5  

>AF039049-3|AAB94251.2|  298|Caenorhabditis elegans Serpentine
           receptor, class x protein66 protein.
          Length = 298

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -2

Query: 162 ISKTK*MVFILKVFSSTWKAKFVRYTCWSY--ELVRY 58
           +SKTK M+FIL +F  T+   F  Y C  Y  E +R+
Sbjct: 117 LSKTKYMIFILWMFELTFALCFYEYLCHFYFDEKIRF 153


>AL023856-7|CAA19563.2|  326|Caenorhabditis elegans Hypothetical
           protein Y94A7B.1 protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 144 MVFILKVFSSTWKAKFVRYTCWSYELVRYKF 52
           +V I+K+F + +   F  +TCW Y  +RY F
Sbjct: 106 LVSIIKMFKNRYYILFSMHTCWRY--IRYSF 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,734,530
Number of Sequences: 27780
Number of extensions: 148446
Number of successful extensions: 407
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)