Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_L10
(898 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyce... 46 7e-06
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 34 0.024
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 33 0.073
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 31 0.17
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 30 0.51
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 29 0.90
SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26 |Schizosac... 29 1.2
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 27 3.6
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 4.8
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 4.8
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 27 4.8
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 6.3
SPAC1705.03c ||SPAC23H4.19|conserved fungal family|Schizosacchar... 26 6.3
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 6.3
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 26 8.4
>SPAC227.02c |||rRNA processing protein Rrp15 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 46.0 bits (104), Expect = 7e-06
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Frame = +1
Query: 355 ADSISKILGS--SKPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEE 528
AD I+ IL ++ + T VLS +KK + ++K EK ++ + +++KE
Sbjct: 68 ADDIADILNQQVTQTDEQDTPVLSLSKKSKKALRKSNAEKKDSKL--RTSRRRERLRKEM 125
Query: 529 INVEPPAKKVKHEKPSIRIKPNVLEKDRERLLNKIATKGVVQLFNAVRNQQKSIEKEMDR 708
+ V E ER L +IA +GVVQLFNAVR Q ++ ++R
Sbjct: 126 VGRVTSVVAVNAETAKALFT-------HERELRRIARRGVVQLFNAVRTAQ--LQSSLNR 176
Query: 709 NDLSEGKKEKI*KNLIRELS 768
++S G+ + + ++ELS
Sbjct: 177 ENISGGRTAR--EQKVKELS 194
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 34.3 bits (75), Expect = 0.024
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 367 SKILGSSKPKN-KKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVE 540
+K++G+ KN KKT V+ + +EI K + K + G N +S VKKEE + +
Sbjct: 81 AKVMGNGGLKNGKKTAVVKEEEDFNEIAKPSPKHKRVSKANGSKNGAKSAVKKEESDTD 139
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 32.7 bits (71), Expect = 0.073
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +1
Query: 358 DSISKILGSSKPKNKKTLVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINV 537
++ +K++ P T + RAK K+ E ++ E + +K++ I
Sbjct: 820 ETFTKLVSVEHPPYSPTSIEQRAKMAKNTTKRQLERAIQAQIEYE-KSVAAKLEDARIQR 878
Query: 538 EPP-AKKVKHEKPSIRIKPNVLEKDRERLLNKIATKGVVQLFNAVRNQQKSIEKEMDRND 714
E A+++ E+ ++ K ++RER L + K ++ ++QQK+ E +M +D
Sbjct: 879 EKEKARRLAEEEALLKEK-----QERERQLQEERQKMQEEVLEWRKSQQKASEDDMSLSD 933
Query: 715 LSE---GKKEK 738
E GKK+K
Sbjct: 934 DEEKQSGKKKK 944
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 31.5 bits (68), Expect = 0.17
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Frame = +1
Query: 403 KTLVLSRAKKHSEI---VKKVKEEKPSFEVIGE-----VNEIESKVKKEEINVEPPAKKV 558
+TL+ + K S + + KEEKP+ E + E V E++SK+ + + E K+V
Sbjct: 15 RTLIRAPINKRSFLWYSTEAAKEEKPAEEKVAETENVDVKELQSKLSELKSKYEAKDKEV 74
Query: 559 KHEKPSIRIK-------PNVLEKDRERLLNKIATKGVVQLFNAVRNQQK--SIEKEMDRN 711
K SIR N +++D E+ K L ++V N ++ SI E RN
Sbjct: 75 AELKGSIRQSLADYRNLENRMKRDMEQTRAFAVQKLTKDLLDSVDNLERALSIVPEEKRN 134
Query: 712 DLSEGK 729
+ K
Sbjct: 135 NRESNK 140
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.9 bits (64), Expect = 0.51
Identities = 18/75 (24%), Positives = 43/75 (57%)
Frame = +1
Query: 481 VIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKDRERLLNKIATKGVVQLF 660
++ ++ +++ + KK++ + KK+ H + S++ K N L E L+++ K + L
Sbjct: 796 LVQQIRKLKDENKKDQSGTDKLMKKIYHCEQSLKEKTNSL----ETLVSE--KKELKNLL 849
Query: 661 NAVRNQQKSIEKEMD 705
+A R +K+I+ E++
Sbjct: 850 DAERRSKKAIQLELE 864
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 29.1 bits (62), Expect = 0.90
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 505 ESKVKKEEINVEPPAKKVKHEKPSIRIK 588
E ++K EE VEPP+KK+ + +PS I+
Sbjct: 1658 EKRMKNEEF-VEPPSKKLANSEPSKEIR 1684
>SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/90 (23%), Positives = 40/90 (44%)
Frame = +1
Query: 439 EIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKDRER 618
++ K +E + E ++E E + +E + + +++ K + EK+ E
Sbjct: 126 QVTFKAEERRKREEKSSNLDEEELRKSRETVYRDATGRRIDLVLARKEAKRKLKEKEEEA 185
Query: 619 LLNKIATKGVVQLFNAVRNQQKSIEKEMDR 708
K +GVVQ+ QQK KE++R
Sbjct: 186 RRQKEQQQGVVQV-----RQQKEYLKELER 210
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 337 LANEGWADSISKILGSSKPKNKKTLVLSR----AKKHSEIVKKVKEEK 468
L N G++ +S++L P N+K ++ + ++ HS++ + V+E K
Sbjct: 185 LFNNGYSSKVSELLRKLSPDNEKPPIVQKIYFTSRTHSQLQQLVQEIK 232
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 382 SSKPKNKKTLVLS-RAKKHSEIVKKV 456
+SKPK KKTLV S K H V+KV
Sbjct: 478 TSKPKAKKTLVTSIPTKPHQASVEKV 503
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Frame = +1
Query: 439 EIVKKVKEEKPSFEVIGEVNEIESKVKKEEIN---VEPPAKKVKHE---KPSIRI 585
+++ K+K +KP E+I E E ++ +IN ++ P K HE KP +R+
Sbjct: 375 DVIAKMKVQKPPKELIDEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRV 429
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +1
Query: 580 RIKPNVLEKDRERLLNKIATKGVVQLFNAVRNQQKSIEK-EMDRN-DLSEGKK 732
++KP+ L K+ + LLN +V V + + IE ++D+N ++SEG++
Sbjct: 275 QLKPSFLPKNTDDLLNGTDDNNIVLREVKVSFENEKIESDDLDKNEEISEGEE 327
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.2 bits (55), Expect = 6.3
Identities = 19/90 (21%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 364 ISKILGSSKPKNKKT-LVLSRAKKHSEIVKKVKEEKPSFEVIGEVNEIESKVKKEEINVE 540
+ KI K ++KK L L++ ++ + E+ + + + + E++ K+EE ++
Sbjct: 588 LKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLK 647
Query: 541 PPAKKVKHEKPSIRIKPNVLEKDRERLLNK 630
+K + E + + +K+RE+ L K
Sbjct: 648 REQEKKQQELERQKREEKQKQKEREKKLKK 677
>SPAC1705.03c ||SPAC23H4.19|conserved fungal
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 590 GLILIDGFSCFTFLAGGSTLISSFLTFD 507
GL IDGF + + GG L+ +F + D
Sbjct: 278 GLTSIDGFPVISEIGGGLVLLGNFSSID 305
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 6.3
Identities = 23/88 (26%), Positives = 37/88 (42%)
Frame = +1
Query: 493 VNEIESKVKKEEINVEPPAKKVKHEKPSIRIKPNVLEKDRERLLNKIATKGVVQLFNAVR 672
+NE+E ++K E+NV + + + KD+E N++ N +R
Sbjct: 547 INELEQRIKSYEVNVSELNGTIDEYRNKL--------KDKEETYNEV-MNAFQYKDNDLR 597
Query: 673 NQQKSIEKEMDRNDLSEGKKEKI*KNLI 756
+SI K DR EK KNL+
Sbjct: 598 RFHESINKLQDREKELTSNLEK--KNLV 623
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 629 LFNNLSLSFSKTFGLILIDGF 567
LF NLS S+SKTF L + + F
Sbjct: 232 LFKNLSPSYSKTFFLFISNQF 252
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,786,837
Number of Sequences: 5004
Number of extensions: 49832
Number of successful extensions: 234
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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