Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_L10
         (898 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              26   0.54 
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    23   2.9  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   3.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   3.8  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 573 INKN*AKRLRKGQRKIIEQNSH*RCSAIIQCSKK 674
           I++N  K+L      I E+N H + S ++QC  K
Sbjct: 92  IDENSVKQLVSDCSTISEENPHLKASKLVQCVSK 125


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = -3

Query: 512 FDSISFTSPITSKLGFSSFTFFTISECFLALDKTNVFLFLGLLEPKI 372
           F SIS T  +  ++GF    ++  S   + +   + +L +    P+I
Sbjct: 218 FSSISITFKLAREMGFFMMDYYIPSILIVVISWVSFWLHMDASPPRI 264


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
 Frame = +1

Query: 409 LVLSRAKKHSEI--VKKVKEEKPSF--EVIGEVNEIESKVKKEEINVEPPAKKVKHEKPS 576
           L+L  A  + EI  + + +E    +  + IGE       V+  E    P  +K+K     
Sbjct: 15  LILQIALVYGEISDIDEFREMTSKYRKKCIGETKTTIEDVEATEYGEFPEDEKLKCYFNC 74

Query: 577 IRIKPNVLEKDRERLLNKIATKGVVQLFNAVRNQQKSIEKEMDRNDLSE 723
           +  K NV++K   ++   +  K + + F  +  +       +D +D  E
Sbjct: 75  VLEKFNVMDKKNGKIRYNLLKKVIPEAFKEIGVEMIDSCSNVDSSDKCE 123


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 385 WNLKFLRLNPPSLRLLKGDSLPLNL 311
           W L     NPP++ L   DSL L++
Sbjct: 303 WQLPHNSTNPPNILLYYRDSLALSV 327


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,482
Number of Sequences: 438
Number of extensions: 3570
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)