Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_L09
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707...    31   1.7  
01_06_0606 + 30554734-30555480,30556508-30556756,30556889-305570...    30   2.9  
08_02_0501 + 17836948-17837373,17837857-17839184,17839270-178393...    29   5.1  
04_03_0283 + 13887388-13887573,13887711-13887806,13888517-138886...    28   9.0  

>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
            27771407-27771773,27772104-27772217,27772307-27772403,
            27772968-27773088,27773168-27773252,27773349-27773498,
            27773630-27773746,27773819-27773905,27773981-27774049,
            27774125-27774181,27774266-27774349,27774477-27774513,
            27774721-27774869,27776053-27776538,27776743-27776886,
            27776961-27777509,27778332-27778526,27779226-27779310,
            27779570-27779670,27779689-27780360,27781101-27781433,
            27781957-27782038,27782258-27782334,27782713-27782817,
            27783810-27783944,27784437-27785159,27785882-27786663,
            27787480-27789187
          Length = 2891

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
 Frame = +1

Query: 358  KYFSFTNVELPVKYNSKFMNSIWGKYNRYSPHNVKKVNDAFVSSGD-----FQQLPVNSS 522
            KY    +  +  K+  K + S+ G   R    N  K++ A  S+GD        +P+N S
Sbjct: 1530 KYQQLKSKLVEKKWKLKIIYSMLGNVER---GNTSKIHQAKKSTGDCVLGPILNMPINES 1586

Query: 523  KNEPMITLPSPKLDNVWAAINVSQS 597
            K + ++   S     VW AI   +S
Sbjct: 1587 KRQRVLVASSILYSEVWHAIGRDRS 1611


>01_06_0606 +
           30554734-30555480,30556508-30556756,30556889-30557011,
           30557187-30557384
          Length = 438

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -2

Query: 374 VKLKYLSGFLPILTLGIFKSRFSR*VSRIRPAVKADGGMQDIFFSSQ 234
           ++LK LSG  P+L +G F    S  + ++RPA+K   G Q  F  ++
Sbjct: 306 LELKSLSGKTPVLDVGTFAKIKSGDI-KVRPAIKQISGRQVEFMDTR 351


>08_02_0501 + 17836948-17837373,17837857-17839184,17839270-17839380,
            17839719-17839998,17840275-17840396,17840451-17840556,
            17840814-17841020,17841130-17841255,17841719-17841817,
            17842265-17842456,17842555-17843073
          Length = 1171

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -2

Query: 347  LPILTLGIFKSRFSR*VSRIRPAVKADGGMQDIFFSSQALHSSKIN--LLSVTVFFCGMM 174
            LP++ LG+F    S  V    P++  D G+ ++FFS   + S  +N    S+ ++F G +
Sbjct: 980  LPVIALGVFDKDVSSRVCLEVPSLHQD-GVNNLFFSWSRILSWMLNGVCCSIIIYF-GAL 1037

Query: 173  SSKLLES 153
             + L+++
Sbjct: 1038 HAVLIQA 1044


>04_03_0283 +
           13887388-13887573,13887711-13887806,13888517-13888637,
           13888734-13888840,13888949-13889166,13890219-13890396,
           13890492-13890611,13891601-13891687,13892401-13892511,
           13892618-13893439
          Length = 681

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 463 KVNDAFVSSGDFQQLPVNSSKNEPM 537
           KV D F+ + ++ ++PV  S +EP+
Sbjct: 244 KVMDVFIKAAEYMEMPVRRSDDEPL 268


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,844,755
Number of Sequences: 37544
Number of extensions: 351617
Number of successful extensions: 750
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)