Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_L03
(919 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D89501-1|BAA13971.1| 134|Homo sapiens PBI protein. 36 0.21
AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isofor... 32 3.4
AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.4
AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.4
AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein. 32 3.4
AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.4
AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.4
AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.4
AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.4
AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.4
AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.4
AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.4
AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.4
AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.4
AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.4
AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein. 32 3.4
AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.4
AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein. 32 3.4
AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein. 32 3.4
AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein. 32 3.4
>D89501-1|BAA13971.1| 134|Homo sapiens PBI protein.
Length = 134
Score = 35.9 bits (79), Expect = 0.21
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +1
Query: 727 PXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXX--PPXXGAXCPXPPXXX 900
P P + P R P LS PP G P PP P R PP G P PP
Sbjct: 52 PPHPPPYGPGRFPPPLS--PPYGPGRIPPSPPPPYGPGRIQSHSLPPPYGPGYPQPPSQP 109
Query: 901 XPVGP 915
P P
Sbjct: 110 RPYPP 114
>AY388963-1|AAR26468.1| 837|Homo sapiens protocadherin 15 isoform B
protein.
Length = 837
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 652 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 709
Query: 880 PXPP 891
P PP
Sbjct: 710 PPPP 713
>AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1770 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1827
Query: 880 PXPP 891
P PP
Sbjct: 1828 PPPP 1831
>AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1770 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1827
Query: 880 PXPP 891
P PP
Sbjct: 1828 PPPP 1831
>AL365496-11|CAH73917.1| 837|Homo sapiens protocadherin 15 protein.
Length = 837
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 652 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 709
Query: 880 PXPP 891
P PP
Sbjct: 710 PPPP 713
>AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1772 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1829
Query: 880 PXPP 891
P PP
Sbjct: 1830 PPPP 1833
>AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1767 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1824
Query: 880 PXPP 891
P PP
Sbjct: 1825 PPPP 1828
>AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1747 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1804
Query: 880 PXPP 891
P PP
Sbjct: 1805 PPPP 1808
>AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1770 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1827
Query: 880 PXPP 891
P PP
Sbjct: 1828 PPPP 1831
>AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1772 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1829
Query: 880 PXPP 891
P PP
Sbjct: 1830 PPPP 1833
>AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1767 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1824
Query: 880 PXPP 891
P PP
Sbjct: 1825 PPPP 1828
>AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1747 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1804
Query: 880 PXPP 891
P PP
Sbjct: 1805 PPPP 1808
>AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1770 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1827
Query: 880 PXPP 891
P PP
Sbjct: 1828 PPPP 1831
>AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1772 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1829
Query: 880 PXPP 891
P PP
Sbjct: 1830 PPPP 1833
>AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1767 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1824
Query: 880 PXPP 891
P PP
Sbjct: 1825 PPPP 1828
>AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1747 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1804
Query: 880 PXPP 891
P PP
Sbjct: 1805 PPPP 1808
>AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1770 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1827
Query: 880 PXPP 891
P PP
Sbjct: 1828 PPPP 1831
>AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1772 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1829
Query: 880 PXPP 891
P PP
Sbjct: 1830 PPPP 1833
>AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1767 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1824
Query: 880 PXPP 891
P PP
Sbjct: 1825 PPPP 1828
>AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +1
Query: 700 DXRRFPXXXPXCAPXFRPCRLPXXLSXFPPSGSXGAXPXPPXXGXPXRCXXXPPXXGAXC 879
D F P +P P LP + FP S S P PP P PP C
Sbjct: 1770 DISPFSLFCPPPSPPSIPLPLPPP-TFFPLSVSTSGPPTPPLL-PPFPTPLPPPPPSIPC 1827
Query: 880 PXPP 891
P PP
Sbjct: 1828 PPPP 1831
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,270,890
Number of Sequences: 237096
Number of extensions: 1358498
Number of successful extensions: 4351
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3908
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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