Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_L02
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 39 0.005
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.087
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.087
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.087
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.20
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.20
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.47
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.47
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.47
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.81
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 3.3
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 3.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 24 3.5
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.3
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 7.6
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 7.6
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/71 (33%), Positives = 24/71 (33%), Gaps = 6/71 (8%)
Frame = +2
Query: 470 PPXFFLKRGPQKKKXXFFXX------FXPPPRAPXXXPPXPXKKGGGXPXGXXPXKXXXP 631
PP L G K FF F PPP P PP P GG P P
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Query: 632 PXKKKXXPPPP 664
P PPPP
Sbjct: 107 PPPMFGAPPPP 117
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +1
Query: 541 PPGPLXXXPXPXXKRXGTXXWFXXRXKXXPPXXK---KXXPPPPXGXGXXXXPPRP 699
PPGP P P G PP PPPP G G PPRP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.087
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Frame = +3
Query: 540 PPG-PPXXX-PPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXX 713
PPG PP PPPP G + P P PP GG P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGGCPPP 771
Query: 714 XXGPPXKTXRGGAPPP 761
PP +GG PPP
Sbjct: 772 PPPPPPGGFKGGPPPP 787
Score = 33.5 bits (73), Expect = 0.20
Identities = 26/89 (29%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Frame = +2
Query: 428 PPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPXPX--KKGGGXPX 601
PP PP P L P P PPP P PP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 602 GXXPXKXXXPPXKKKXXPPPPGGXGXKXP 688
G P PP K PPPP G P
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.087
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Frame = +3
Query: 540 PPG-PPXXX-PPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXX 713
PPG PP PPPP G + P P PP GG P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGGCPPP 771
Query: 714 XXGPPXKTXRGGAPPP 761
PP +GG PPP
Sbjct: 772 PPPPPPGGFKGGPPPP 787
Score = 33.5 bits (73), Expect = 0.20
Identities = 26/89 (29%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Frame = +2
Query: 428 PPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPXPX--KKGGGXPX 601
PP PP P L P P PPP P PP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 602 GXXPXKXXXPPXKKKXXPPPPGGXGXKXP 688
G P PP K PPPP G P
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.087
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Frame = +3
Query: 540 PPG-PPXXX-PPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXX 713
PPG PP PPPP G + P P PP GG P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGGCPPP 354
Query: 714 XXGPPXKTXRGGAPPP 761
PP +GG PPP
Sbjct: 355 PPPPPPGGFKGGPPPP 370
Score = 33.5 bits (73), Expect = 0.20
Identities = 26/89 (29%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Frame = +2
Query: 428 PPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPXPX--KKGGGXPX 601
PP PP P L P P PPP P PP P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 602 GXXPXKXXXPPXKKKXXPPPPGGXGXKXP 688
G P PP K PPPP G P
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/81 (28%), Positives = 25/81 (30%)
Frame = +2
Query: 428 PPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPXPXKKGGGXPXGX 607
PP P P + P R P + PPP P P P G P
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPP--PPPPPPGRTPGPPGMPGMPPPP-- 320
Query: 608 XPXKXXXPPXKKKXXPPPPGG 670
P PP PPPP G
Sbjct: 321 -PPSRFGPPGMGGMPPPPPPG 340
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/81 (25%), Positives = 23/81 (28%)
Frame = +2
Query: 446 PPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPXPXKKGGGXPXGXXPXKXX 625
PP P PP P PPP + PP P G P
Sbjct: 261 PPVPP---PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
Query: 626 XPPXKKKXXPPPPGGXGXKXP 688
PP + PP GG P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPP 338
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/75 (25%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXV-VXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXX 716
PPG P PPPP + G + P + PPP P
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 369
Query: 717 XGPPXKTXRGGAPPP 761
P + G PPP
Sbjct: 370 RPPAPPSGHGMIPPP 384
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/85 (29%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Frame = +2
Query: 428 PPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPP--RAPXXXPPXPXKK----GG 589
P PP P + PP + GP PPP R P PP P + G
Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGM---PPPPPPGMRYPGGMPPPPPPRYPSAGP 360
Query: 590 GXPXGXXPXKXXXPPXKKKXXPPPP 664
G P + PP PPPP
Sbjct: 361 GMYPPPPPSRPPAPPSGHGMIPPPP 385
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/81 (28%), Positives = 25/81 (30%)
Frame = +2
Query: 428 PPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPXPXKKGGGXPXGX 607
PP P P + P R P + PPP P P P G P
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPP--PPPPPPGRTPGPPGMPGMPPPP-- 330
Query: 608 XPXKXXXPPXKKKXXPPPPGG 670
P PP PPPP G
Sbjct: 331 -PPSRFGPPGMGGMPPPPPPG 350
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/81 (25%), Positives = 23/81 (28%)
Frame = +2
Query: 446 PPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPXPXKKGGGXPXGXXPXKXX 625
PP P PP P PPP + PP P G P
Sbjct: 271 PPVPP---PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
Query: 626 XPPXKKKXXPPPPGGXGXKXP 688
PP + PP GG P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPP 348
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/75 (25%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXV-VXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXX 716
PPG P PPPP + G + P + PPP P
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 379
Query: 717 XGPPXKTXRGGAPPP 761
P + G PPP
Sbjct: 380 RPPAPPSGHGMIPPP 394
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/85 (29%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Frame = +2
Query: 428 PPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPP--RAPXXXPPXPXKK----GG 589
P PP P + PP + GP PPP R P PP P + G
Sbjct: 314 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGM---PPPPPPGMRYPGGMPPPPPPRYPSAGP 370
Query: 590 GXPXGXXPXKXXXPPXKKKXXPPPP 664
G P + PP PPPP
Sbjct: 371 GMYPPPPPSRPPAPPSGHGMIPPPP 395
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 536 PPPRAPXXXPPXPXKKGGGXPXGXXPXKXXXPPXKKKXXPPP 661
PPPR P PP P ++ P P P PPP
Sbjct: 155 PPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +3
Query: 549 PPXXXPPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXXXGPP 728
PP PPPP G + P PPP G P G P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSP 289
Query: 729 XKTXRGGAPPP 761
G PPP
Sbjct: 290 PPPRAGSPPPP 300
Score = 32.3 bits (70), Expect = 0.47
Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Frame = +2
Query: 428 PPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPX---PXKKGGGXP 598
PP PP P PP P + PPP P PP P + GG P
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS----PPPPPPPRGSPPTGSLPPPQAGGSP 321
Query: 599 XGXXPXKXXXPPXKKKXXP---PPPG 667
PP +K+ P PP G
Sbjct: 322 PPAGTGSPPPPPRQKRQAPERSPPTG 347
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/73 (27%), Positives = 23/73 (31%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXXX 719
PP P PPPP G P P + PPP G P
Sbjct: 289 PPPPRAGSPPPPPPPRGS------PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPER 342
Query: 720 GPPXKTXRGGAPP 758
PP + G+PP
Sbjct: 343 SPPTGSPPTGSPP 355
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = +2
Query: 536 PPPRAPXXXPPXPXKKGGGXPXGXX---PXKXXXPPXKKKXXPPPPGGXGXKXPXR 694
PPP P PP P P + PP PPPP G P R
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +2
Query: 536 PPPRAPXXXPPXPXKKGGGXPXGXXPXKXXXPPXKKKXXPPPPGGXGXKXPXR 694
PPPRA PP P + G P G P P + PPP G P R
Sbjct: 290 PPPRAGSPPPPPPPR--GSPPTGSLP------PPQAGGSPPPAGTGSPPPPPR 334
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +2
Query: 536 PPPRAPXXXPP---XPXKKGGGXPXGXXPXKXXXPPXKKKXXPPPPGGXGXKXP 688
PP +P PP P G G P P PP + PPPP G P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/78 (24%), Positives = 21/78 (26%), Gaps = 4/78 (5%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXVVXX----PXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXX 707
PP PP PPP + P P + PPP P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 708 XXXXGPPXKTXRGGAPPP 761
G P G PPP
Sbjct: 315 PQAGGSPPPAGTGSPPPP 332
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXXX 719
PP PP PP G P P + PPP G P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 720 G-PPXKTXRGGAPP 758
G PP G+PP
Sbjct: 295 GSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +3
Query: 549 PPXXXPPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXXXGPP 728
PP PPPP G + P PPP G P G P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSP 310
Query: 729 XKTXRGGAPPP 761
G PPP
Sbjct: 311 PPPRAGSPPPP 321
Score = 32.3 bits (70), Expect = 0.47
Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Frame = +2
Query: 428 PPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPX---PXKKGGGXP 598
PP PP P PP P + PPP P PP P + GG P
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS----PPPPPPPRGSPPTGSLPPPQAGGSP 342
Query: 599 XGXXPXKXXXPPXKKKXXP---PPPG 667
PP +K+ P PP G
Sbjct: 343 PPAGTGSPPPPPRQKRQAPERSPPTG 368
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/73 (27%), Positives = 23/73 (31%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXXX 719
PP P PPPP G P P + PPP G P
Sbjct: 310 PPPPRAGSPPPPPPPRGS------PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPER 363
Query: 720 GPPXKTXRGGAPP 758
PP + G+PP
Sbjct: 364 SPPTGSPPTGSPP 376
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = +2
Query: 536 PPPRAPXXXPPXPXKKGGGXPXGXX---PXKXXXPPXKKKXXPPPPGGXGXKXPXR 694
PPP P PP P P + PP PPPP G P R
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +2
Query: 536 PPPRAPXXXPPXPXKKGGGXPXGXXPXKXXXPPXKKKXXPPPPGGXGXKXPXR 694
PPPRA PP P + G P G P P + PPP G P R
Sbjct: 311 PPPRAGSPPPPPPPR--GSPPTGSLP------PPQAGGSPPPAGTGSPPPPPR 355
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +2
Query: 536 PPPRAPXXXPP---XPXKKGGGXPXGXXPXKXXXPPXKKKXXPPPPGGXGXKXP 688
PP +P PP P G G P P PP + PPPP G P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/78 (24%), Positives = 21/78 (26%), Gaps = 4/78 (5%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXVVXX----PXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXX 707
PP PP PPP + P P + PPP P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 708 XXXXGPPXKTXRGGAPPP 761
G P G PPP
Sbjct: 336 PQAGGSPPPAGTGSPPPP 353
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXXX 719
PP PP PP G P P + PPP G P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 720 G-PPXKTXRGGAPP 758
G PP G+PP
Sbjct: 316 GSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +3
Query: 549 PPXXXPPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXXXGPP 728
PP PPPP G + P PPP G P G P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSP 295
Query: 729 XKTXRGGAPPP 761
G PPP
Sbjct: 296 PPPRAGSPPPP 306
Score = 32.3 bits (70), Expect = 0.47
Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Frame = +2
Query: 428 PPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPX---PXKKGGGXP 598
PP PP P PP P + PPP P PP P + GG P
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS----PPPPPPPRGSPPTGSLPPPQAGGSP 327
Query: 599 XGXXPXKXXXPPXKKKXXP---PPPG 667
PP +K+ P PP G
Sbjct: 328 PPAGTGSPPPPPRQKRQAPERSPPTG 353
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/73 (27%), Positives = 23/73 (31%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXXX 719
PP P PPPP G P P + PPP G P
Sbjct: 295 PPPPRAGSPPPPPPPRGS------PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPER 348
Query: 720 GPPXKTXRGGAPP 758
PP + G+PP
Sbjct: 349 SPPTGSPPTGSPP 361
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = +2
Query: 536 PPPRAPXXXPPXPXKKGGGXPXGXX---PXKXXXPPXKKKXXPPPPGGXGXKXPXR 694
PPP P PP P P + PP PPPP G P R
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +2
Query: 536 PPPRAPXXXPPXPXKKGGGXPXGXXPXKXXXPPXKKKXXPPPPGGXGXKXPXR 694
PPPRA PP P + G P G P P + PPP G P R
Sbjct: 296 PPPRAGSPPPPPPPR--GSPPTGSLP------PPQAGGSPPPAGTGSPPPPPR 340
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +2
Query: 536 PPPRAPXXXPP---XPXKKGGGXPXGXXPXKXXXPPXKKKXXPPPPGGXGXKXP 688
PP +P PP P G G P P PP + PPPP G P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/78 (24%), Positives = 21/78 (26%), Gaps = 4/78 (5%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXVVXX----PXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXX 707
PP PP PPP + P P + PPP P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 708 XXXXGPPXKTXRGGAPPP 761
G P G PPP
Sbjct: 321 PQAGGSPPPAGTGSPPPP 338
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Frame = +3
Query: 540 PPGPPXXXPPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXXXXX 719
PP PP PP G P P + PPP G P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 720 G-PPXKTXRGGAPP 758
G PP G+PP
Sbjct: 301 GSPPPPPPPRGSPP 314
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +2
Query: 536 PPPRAPXXXPPXPXKKGGGXPXGXXPXKXXXPPXKKKXXPPPPGGXGXK 682
PPP+ PP P + + PP K PPPP G K
Sbjct: 253 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPTGEPEK 301
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = +3
Query: 540 PPGPPXXX---PPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXX 710
PP PP PPPP + D + P K PPP A
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYAS 217
Query: 711 XXXGPPXKTXRGGAPPP 761
PP K PPP
Sbjct: 218 RRPPPPPKGTGSPTPPP 234
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = +3
Query: 540 PPGPPXXX---PPPPXKKXGDXXVVXXPXKXXXPQXKKKXXPPPXGGXXXXXPXAXXXXX 710
PP PP PPPP + D + P K PPP A
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNA 92
Query: 711 XXXGPPXKTXRGGAPPP 761
PP G PPP
Sbjct: 93 SRRPPPPPKGTGTPPPP 109
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 663 GGGGXXFFXXGGXXFXXGXKPXGXPPPFXXGXGGXXXGARGGG 535
GGGG GG G P PP G GG G GGG
Sbjct: 37 GGGGGC---GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGG 76
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/91 (28%), Positives = 30/91 (32%), Gaps = 1/91 (1%)
Frame = +2
Query: 401 PXXFXYFLXPPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPXPXK 580
P F +F PP PP PH F+ RG F P PP P
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPH------FMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMM 343
Query: 581 -KGGGXPXGXXPXKXXXPPXKKKXXPPPPGG 670
+GG P P P + PP GG
Sbjct: 344 FRGGPYPPFFPP---PPPHFMRPSSPPTDGG 371
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/91 (28%), Positives = 30/91 (32%), Gaps = 1/91 (1%)
Frame = +2
Query: 401 PXXFXYFLXPPXXXXPPXXPHLXPPXFFLKRGPQKKKXXFFXXFXPPPRAPXXXPPXPXK 580
P F +F PP PP PH F+ RG F P PP P
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPH------FMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMM 343
Query: 581 -KGGGXPXGXXPXKXXXPPXKKKXXPPPPGG 670
+GG P P P + PP GG
Sbjct: 344 FRGGPYPPFFPP---PPPHFMRPSSPPTDGG 371
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 24.2 bits (50), Expect(2) = 3.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 530 FXPPPRAPXXXPPXPXKKGGGXP 598
F PPP AP PP G P
Sbjct: 748 FAPPPGAPYGYPPGAPPPAGFHP 770
Score = 23.4 bits (48), Expect(2) = 3.5
Identities = 11/35 (31%), Positives = 12/35 (34%)
Frame = +2
Query: 584 GGGXPXGXXPXKXXXPPXKKKXXPPPPGGXGXKXP 688
GG P P P + PPPP G P
Sbjct: 805 GGPRPPYPYPGGPVPPGPPQNRMPPPPPAQGAPSP 839
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +2
Query: 536 PPPRAPXXXPPXPX--KKGGGXPXGXXPXKXXXPPXKKKXXPPPPGGXGXKXPXR 694
PPP PP P G P P + P PPPG G P R
Sbjct: 134 PPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPR 188
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +2
Query: 536 PPPRAPXXXPPXPX--KKGGGXPXGXXPXKXXXPPXKKKXXPPPPGGXGXKXPXR 694
PPP PP P G P P + P PPPG G P R
Sbjct: 134 PPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPR 188
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/83 (30%), Positives = 25/83 (30%), Gaps = 6/83 (7%)
Frame = +3
Query: 531 FXXPP--GPPXXXPPPPXKKXGDXXVVXXPXKXXXPQXKKKXXP----PPXGGXXXXXPX 692
F PP GPP PPP G P P P PP GG P
Sbjct: 378 FAPPPQSGPPGAFAPPP-SAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPP 436
Query: 693 AXXXXXXXXGPPXKTXRGGAPPP 761
PP GAPPP
Sbjct: 437 PPGGPGAYGPPPTGFPPVGAPPP 459
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 536 PPPR---APXXXPPXPXKKGGGXPXGXXPXKXXXPPXKKKXXPPPPG 667
PPPR +P P P + GGG P P PP + PP PG
Sbjct: 1469 PPPRGMNSPMRGMPPPMR-GGGPPMRGGPPMRGGPP-MFRGGPPGPG 1513
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +2
Query: 536 PPPRAPXXXPPXPXKKGGGXPXGXXPXKXXXPPXKKKXXPPPPG 667
PPP P P P + GG P P PP PPPPG
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIP--PPPPLGIIPP------PPPPG 805
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +2
Query: 536 PPPRAPXXXPPXPXKKGGGXPXGXXPXKXXXPPXKKKXXPPPPG 667
PPP P P P + GG P P PP PPPPG
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIP--PPPPLGIIPP------PPPPG 805
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,719,236
Number of Sequences: 27780
Number of extensions: 269917
Number of successful extensions: 1440
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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