Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_K22
         (979 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   1.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   2.4  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   3.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.2  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   5.6  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   7.3  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   7.3  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    22   7.3  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 864 PPXPPXXPXGGPXXXPPPPGXXGXPP 941
           P  P       P   PPP G  G PP
Sbjct: 31  PQAPQRGSPPNPSQGPPPGGPPGAPP 56



 Score = 23.8 bits (49), Expect = 2.4
 Identities = 12/42 (28%), Positives = 12/42 (28%)
 Frame = +3

Query: 852 GGGGPPXPPXXPXGGPXXXPPPPGXXGXPPPXXXGGXAXXRP 977
           G  GP   P      P    PP    G PP    G      P
Sbjct: 19  GAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60



 Score = 23.8 bits (49), Expect = 2.4
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = +1

Query: 853 GGGXPXPPPXXXRGAPPXXPPPXAXXXVPPPXGXGG 960
           G   P P P     AP    PP      PPP G  G
Sbjct: 19  GAPGPQPSPHQSPQAPQRGSPPNPSQG-PPPGGPPG 53


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -3

Query: 959 PPXPXGGGTXXXAXGGGXXGGAPRXXXGGGXG 864
           P     GG    A GG    GA     GGG G
Sbjct: 22  PGSSSAGGVVTGASGGSIVVGANNGGGGGGLG 53


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 556 PXPPPPPP 579
           P PPPPPP
Sbjct: 341 PAPPPPPP 348



 Score = 21.8 bits (44), Expect = 9.7
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 554 PRXPPPPPPGXXP 592
           P  PPPPP    P
Sbjct: 341 PAPPPPPPSSSGP 353


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 556  PXPPPPPP 579
            P PPPPPP
Sbjct: 1355 PPPPPPPP 1362


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 556  PXPPPPPP 579
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +1

Query: 499 PRPXAXPPPXPGXXXXXXXPXPPPPPP 579
           PR    P   PG       P P PP P
Sbjct: 114 PRLRREPEAEPGNNRPVYIPQPRPPHP 140



 Score = 22.6 bits (46), Expect = 5.6
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +1

Query: 499 PRPXAXPPPXPGXXXXXXXPXPPPPPP 579
           PR    P   PG       P P PP P
Sbjct: 140 PRLRREPEAEPGNNRPVYIPQPRPPHP 166



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 33  RREAKPEAEPGNNRPIYIPQPRPPHP 58



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 61  RREAEPKAEPGNNRPIYIPQPRPPHP 86


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 32  RREAKPEAEPGNNRPVYIPQPRPPHP 57



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 60  RREAEPEAEPGNNRPVYIPQPRPPHP 85



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 116 RREAEPEAEPGNNRPVYIPQPRPPHP 141



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 172 RREAEPEAEPGNNRPVYIPQPRPPHP 197



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 200 RREAEPEAEPGNNRPVYIPQPRPPHP 225



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 228 RREAEPEAEPGNNRPVYIPQPRPPHP 253



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 256 RREAKPEAKPGNNRPVYIPQPRPPHP 281


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 33  RREAEPEAEPGNNRPVYIPQPRPPHP 58



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 61  RREAEPEAEPGNNRPVYIPQPRPPHP 86



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 89  RREAEPEAEPGNNRPVYIPQPRPPHP 114



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 117 RREAEPEAEPGNNRPVYIPQPRPPHP 142


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 4   RREAKPEAEPGNNRPVYIPQPRPPHP 29



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 32  RREAEPEAEPGNNRPVYIPQPRPPHP 57



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 60  RREAEPEAEPGNNRPVYIPQPRPPHP 85



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 88  RREAEPEAEPGNNRPVYIPQPRPPHP 113



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 116 RREAEPEAEPGNNRPVYIPQPRPPHP 141



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 144 RREAKPEAEPGNNRPVYIPQPRPPHP 169



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 502 RPXAXPPPXPGXXXXXXXPXPPPPPP 579
           R  A P   PG       P P PP P
Sbjct: 172 RREAEPEAEPGNNRPVYIPQPRPPHP 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.152    0.518 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,794
Number of Sequences: 438
Number of extensions: 7636
Number of successful extensions: 43
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32290713
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)