Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_K17
         (896 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...   171   6e-43
AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical ...    50   2e-06
AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical ...    50   2e-06
AC006671-4|AAF39917.1|  373|Caenorhabditis elegans Hypothetical ...    31   0.85 
AC006744-2|AAF60505.2|  503|Caenorhabditis elegans Cytochrome p4...    29   3.4  

>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score =  171 bits (416), Expect = 6e-43
 Identities = 77/119 (64%), Positives = 96/119 (80%)
 Frame = +2

Query: 488 RGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLDNLVVIFDVNR 667
           +GL VA GMAYVGKY D+A YRV+CL+GDGE+AEGS+WE+  FAS YKLDNLV I DVNR
Sbjct: 123 QGLGVATGMAYVGKYIDKASYRVFCLLGDGESAEGSVWEAAAFASIYKLDNLVAIVDVNR 182

Query: 668 LGQSEPTSLQHQLEVYDARLKAFGLNSLVVDGHDVTELVKAFDEAASVTGKPTALVAKT 844
           LGQS+ TSL H +E Y AR  AFG N+++V+GH+V EL+ A++ A S  GKPTA++AKT
Sbjct: 183 LGQSQATSLGHDVETYKARFAAFGFNAIIVNGHNVDELLAAYETARSTKGKPTAIIAKT 241



 Score =  163 bits (397), Expect = 1e-40
 Identities = 75/111 (67%), Positives = 90/111 (81%)
 Frame = +1

Query: 151 LKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYKISAPRDASADRFILS 330
           L+D AN++RI SI  T ASKSGHPTS  S AEIMS LFF  M+Y ++ P+ ASADRF+LS
Sbjct: 11  LEDAANRMRISSIEMTCASKSGHPTSSTSAAEIMSTLFFSEMKYDVAEPKSASADRFVLS 70

Query: 331 KGHAAPILYAAWAEAGLFPLDELKNLRKLDSDLEGHPTPRLNFVDVGTGSL 483
           KGHA PILYAAW EAGL   +++ +LRK+DSD+EGHPTPRLNF+DV TGSL
Sbjct: 71  KGHACPILYAAWEEAGLLSHEQVLSLRKIDSDIEGHPTPRLNFIDVATGSL 121


>AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3b protein.
          Length = 432

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
 Frame = +2

Query: 458 SWTSAPAPWARGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLD 637
           ++ +  +P    L  A G AY  K             GDG A+EG    + +FA+  K  
Sbjct: 185 NFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNFAATLKCP 244

Query: 638 NLVVIFDVNRLGQSEPTSLQHQLEVYDARLKAFGLNSLVVDGHDVTELVKAFDEA--ASV 811
            ++     N    S PTS Q+  +    +  A+GL+++ VDG+D+  +  A  EA   ++
Sbjct: 245 -IIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNATKEARRVAL 303

Query: 812 TGKPTALVAKTY 847
           T +P  + A TY
Sbjct: 304 TNRPVLIEAMTY 315


>AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3a protein.
          Length = 431

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
 Frame = +2

Query: 458 SWTSAPAPWARGLAVAAGMAYVGKYFDQAPYRVYCLVGDGEAAEGSIWESLHFASHYKLD 637
           ++ +  +P    L  A G AY  K             GDG A+EG    + +FA+  K  
Sbjct: 184 NFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNFAATLKCP 243

Query: 638 NLVVIFDVNRLGQSEPTSLQHQLEVYDARLKAFGLNSLVVDGHDVTELVKAFDEA--ASV 811
            ++     N    S PTS Q+  +    +  A+GL+++ VDG+D+  +  A  EA   ++
Sbjct: 244 -IIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNATKEARRVAL 302

Query: 812 TGKPTALVAKTY 847
           T +P  + A TY
Sbjct: 303 TNRPVLIEAMTY 314


>AC006671-4|AAF39917.1|  373|Caenorhabditis elegans Hypothetical
           protein K08A2.4 protein.
          Length = 373

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -2

Query: 730 LQARVVHFQLMLQRGGLGLPQTVNIEDDDEVVQLVVAGEVQRLPDAALGRLSVAHQAIH 554
           L+  V  +  ML+ G     +   I+ DD +++ VV  E++++PD   G  +   QA H
Sbjct: 28  LRITVQEYMAMLKSGR----KVYEIKPDDRILKKVVMSEIEKIPDMWAGEKNTNRQAEH 82


>AC006744-2|AAF60505.2|  503|Caenorhabditis elegans Cytochrome p450
           family protein 29A3 protein.
          Length = 503

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 176 LNLLAISFSCSKSTFLSPFIFGMYSMPYLFC-HETTLNASAWISQNLKEFPIVNR 15
           +N L I  S  +S+ LSP         ++F  H+TT  + +W+  NL   P + +
Sbjct: 280 MNFLDILLSNEESSVLSPEDLRQEVDTFMFAGHDTTTTSVSWVCWNLAHHPDIQQ 334


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,064,780
Number of Sequences: 27780
Number of extensions: 356394
Number of successful extensions: 1118
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)