Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_K15
         (995 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128...    49   5e-06
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140...    45   8e-05
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066...    44   1e-04
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910...    42   8e-04
01_05_0543 + 23093519-23093624,23093912-23093934                       35   0.088
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000...    35   0.12 
08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004           29   7.6  
08_01_0170 - 1440908-1441072,1441539-1441581,1442155-1442619,144...    29   7.6  

>02_05_0620 -
           30412004-30412429,30412509-30412646,30412729-30412866,
           30412966-30413139,30413211-30413684,30413775-30413917,
           30414002-30414160,30414943-30415042
          Length = 583

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 402 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVA 515
           VDVKYTKL IN  +VDA S KTF T++P+   VI +VA
Sbjct: 68  VDVKYTKLLINGNFVDAASGKTFATVDPRTGDVIARVA 105


>01_05_0545 +
           23109920-23110040,23113363-23113505,23113626-23114009,
           23114106-23114219,23114310-23114483,23114608-23114745,
           23114884-23115021,23115094-23115155,23115268-23115541
          Length = 515

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = +3

Query: 393 MVKVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVA 515
           +V  ++K+TKLFIN E+VDA S KTF T +P+   V+  +A
Sbjct: 19  LVVPEIKFTKLFINGEFVDAASGKTFKTRDPRTGDVLAHIA 59



 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +2

Query: 524 DKADIDLAVAAAKKAFHRYSPW 589
           DKAD+DLAV AA++AF  +  W
Sbjct: 62  DKADVDLAVKAAREAF-EHGKW 82


>06_03_0627 +
           22903346-22903523,22906010-22906152,22906235-22906618,
           22906980-22907069,22907147-22907320,22907414-22907551,
           22907719-22907856,22907958-22908019,22908240-22908513
          Length = 526

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 20/37 (54%), Positives = 27/37 (72%)
 Frame = +3

Query: 405 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVA 515
           +++YTKLFIN  +VDA S KTF T +P+   VI +VA
Sbjct: 42  EIRYTKLFINGRFVDAASGKTFETRDPRTGDVIARVA 78


>06_01_1105 +
           9102059-9102167,9103770-9103907,9104125-9104267,
           9104362-9104515,9104610-9104839,9105382-9105471,
           9105606-9105779,9105873-9106010,9106212-9106349,
           9106450-9106511,9106744-9106972,9108531-9109364
          Length = 812

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = +3

Query: 402 VDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAAXEIRRI 536
           V V YT+L I+ ++VD+ S KTFPT++P+   +I  VA  +   I
Sbjct: 64  VQVNYTQLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDI 108


>01_05_0543 + 23093519-23093624,23093912-23093934
          Length = 42

 Score = 35.1 bits (77), Expect = 0.088
 Identities = 14/23 (60%), Positives = 20/23 (86%)
 Frame = +3

Query: 399 KVDVKYTKLFINNEWVDAVSKKT 467
           K+++K+TKLFIN  +VDAVS +T
Sbjct: 16  KLEIKFTKLFINGRFVDAVSDET 38


>01_05_0544 +
           23098921-23098953,23099209-23099272,23099942-23100084,
           23100246-23100719,23100950-23101123,23101230-23101367,
           23101489-23101589,23101910-23102183
          Length = 466

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +2

Query: 524 DKADIDLAVAAAKKAFHRYSPWXYHGPLLKGR 619
           DKADIDLAV AA++AF  + PW       +GR
Sbjct: 54  DKADIDLAVKAAREAFD-HGPWPRMSGFARGR 84


>08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004
          Length = 681

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
 Frame = -2

Query: 178 YQLTFWFFSSSRSFLQK-------PRPPKKP 107
           +QLT W+F SS SF QK       P PP  P
Sbjct: 253 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 283


>08_01_0170 -
           1440908-1441072,1441539-1441581,1442155-1442619,
           1442714-1444149
          Length = 702

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
 Frame = -2

Query: 178 YQLTFWFFSSSRSFLQK-------PRPPKKP 107
           +QLT W+F SS SF QK       P PP  P
Sbjct: 256 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 286


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,998,995
Number of Sequences: 37544
Number of extensions: 457841
Number of successful extensions: 1213
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2916970260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)