BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_K08
(1181 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 36 0.29
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 36 0.29
U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein. 34 1.2
U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein. 34 1.2
D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein. 34 1.2
D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein. 34 1.2
BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein. 34 1.2
AB209345-1|BAD92582.1| 774|Homo sapiens atrophin-1 variant prot... 34 1.2
AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens ... 33 1.5
AB209431-1|BAD92668.1| 951|Homo sapiens TYRO3 protein tyrosine ... 33 1.5
BC015621-1|AAH15621.1| 245|Homo sapiens C14orf32 protein protein. 33 2.0
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 33 2.0
AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens ... 32 3.5
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 32 4.7
AK090519-1|BAC03470.1| 464|Homo sapiens protein ( Homo sapiens ... 32 4.7
AF270513-1|AAK37963.1| 1053|Homo sapiens extracellular glycoprot... 32 4.7
BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein. 31 8.1
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 35.9 bits (79), Expect = 0.29
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 474 PPAPXXYPRPXLPXPXPXXAAXTXEAXTPXGRPPPXETLRSPXERXP 614
PP P P+P LP P P A P PPP + SP P
Sbjct: 107 PPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPP 153
Score = 31.9 bits (69), Expect = 4.7
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +3
Query: 474 PPAPXXYPRPXLPXPXPXXAAXTXE---AXTPXGRPPP 578
PPAP P+P P P P A + A TP PPP
Sbjct: 98 PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPP 135
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 35.9 bits (79), Expect = 0.29
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 474 PPAPXXYPRPXLPXPXPXXAAXTXEAXTPXGRPPPXETLRSPXERXP 614
PP P P+P LP P P A P PPP + SP P
Sbjct: 652 PPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPP 698
Score = 31.9 bits (69), Expect = 4.7
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +3
Query: 474 PPAPXXYPRPXLPXPXPXXAAXTXE---AXTPXGRPPP 578
PPAP P+P P P P A + A TP PPP
Sbjct: 643 PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPP 680
>U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein.
Length = 1190
Score = 33.9 bits (74), Expect = 1.2
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = +2
Query: 449 PAHPGWXLPXSPVXIPAPXPPXXXAXXXRXHSXGXHPPXXAAPXGDPPLPXRTXXSXLA- 625
PA PG P SP P P PP + PP AAP PPL A
Sbjct: 679 PAGPGTFKPGSPTVGPGPLPPAGPSGLPSL------PPPPAAPASGPPLSATQIKQEPAE 732
Query: 626 ---VPXSXX*XXRXPRPP 670
P S R P PP
Sbjct: 733 EYETPESPVPPARSPSPP 750
>U23851-1|AAB50276.1| 1184|Homo sapiens atrophin-1 protein.
Length = 1184
Score = 33.9 bits (74), Expect = 1.2
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = +2
Query: 449 PAHPGWXLPXSPVXIPAPXPPXXXAXXXRXHSXGXHPPXXAAPXGDPPLPXRTXXSXLA- 625
PA PG P SP P P PP + PP AAP PPL A
Sbjct: 673 PAGPGTFKPGSPTVGPGPLPPAGPSGLPSL------PPPPAAPASGPPLSATQIKQEPAE 726
Query: 626 ---VPXSXX*XXRXPRPP 670
P S R P PP
Sbjct: 727 EYETPESPVPPARSPSPP 744
>D38529-1|BAA07534.1| 1182|Homo sapiens DRPLA protein protein.
Length = 1182
Score = 33.9 bits (74), Expect = 1.2
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = +2
Query: 449 PAHPGWXLPXSPVXIPAPXPPXXXAXXXRXHSXGXHPPXXAAPXGDPPLPXRTXXSXLA- 625
PA PG P SP P P PP + PP AAP PPL A
Sbjct: 674 PAGPGTFKPGSPTVGPGPLPPAGPSGLPSL------PPPPAAPASGPPLSATQIKQEPAE 727
Query: 626 ---VPXSXX*XXRXPRPP 670
P S R P PP
Sbjct: 728 EYETPESPVPPARSPSPP 745
>D31840-1|BAA06626.1| 1185|Homo sapiens DRPLA protein.
Length = 1185
Score = 33.9 bits (74), Expect = 1.2
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = +2
Query: 449 PAHPGWXLPXSPVXIPAPXPPXXXAXXXRXHSXGXHPPXXAAPXGDPPLPXRTXXSXLA- 625
PA PG P SP P P PP + PP AAP PPL A
Sbjct: 674 PAGPGTFKPGSPTVGPGPLPPAGPSGLPSL------PPPPAAPASGPPLSATQIKQEPAE 727
Query: 626 ---VPXSXX*XXRXPRPP 670
P S R P PP
Sbjct: 728 EYETPESPVPPARSPSPP 745
>BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein.
Length = 1191
Score = 33.9 bits (74), Expect = 1.2
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = +2
Query: 449 PAHPGWXLPXSPVXIPAPXPPXXXAXXXRXHSXGXHPPXXAAPXGDPPLPXRTXXSXLA- 625
PA PG P SP P P PP + PP AAP PPL A
Sbjct: 680 PAGPGTFKPGSPTVGPGPLPPAGPSGLPSL------PPPPAAPASGPPLSATQIKQEPAE 733
Query: 626 ---VPXSXX*XXRXPRPP 670
P S R P PP
Sbjct: 734 EYETPESPVPPARSPSPP 751
>AB209345-1|BAD92582.1| 774|Homo sapiens atrophin-1 variant
protein.
Length = 774
Score = 33.9 bits (74), Expect = 1.2
Identities = 26/78 (33%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = +2
Query: 449 PAHPGWXLPXSPVXIPAPXPPXXXAXXXRXHSXGXHPPXXAAPXGDPPLPXRTXXSXLA- 625
PA PG P SP P P PP + PP AAP PPL A
Sbjct: 263 PAGPGTFKPGSPTVGPGPLPPAGPSGLPSL------PPPPAAPASGPPLSATQIKQEPAE 316
Query: 626 ---VPXSXX*XXRXPRPP 670
P S R P PP
Sbjct: 317 EYETPESPVPPARSPSPP 334
>AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens
cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
Length = 169
Score = 33.5 bits (73), Expect = 1.5
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = +2
Query: 449 PAHPGWXLPXSPVXIPAPXPPXXXAXXXRXHSXGXHPPXXAAPXGDPPLPXRTXXSXLAV 628
P HP + P P PA P + G PP P G PP P A+
Sbjct: 28 PPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPGPPPPPFTGADGQPAI 87
Query: 629 P 631
P
Sbjct: 88 P 88
>AB209431-1|BAD92668.1| 951|Homo sapiens TYRO3 protein tyrosine
kinase variant protein.
Length = 951
Score = 33.5 bits (73), Expect = 1.5
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +2
Query: 419 GRXSRFXXVXPAHPGWXLPXSPVXIPAPXPPXXXAXXXRXHSXGXHPPXXAAPXGDPPLP 598
GR S PA P LP +P P P PP H P G P LP
Sbjct: 15 GRLSTAPRAAPAPPAALLPPAPFPPPPPRPPPSSLAGRARHGAASPPMALRRSMGRPGLP 74
>BC015621-1|AAH15621.1| 245|Homo sapiens C14orf32 protein protein.
Length = 245
Score = 33.1 bits (72), Expect = 2.0
Identities = 34/108 (31%), Positives = 36/108 (33%), Gaps = 5/108 (4%)
Frame = +3
Query: 309 PGHIP--WDG-NPWIXRXPSWXALAXXXXCPSDXSPXXXSAGKA--GSXAXXRPTXAGXS 473
PG P W G NPW PS + PS +P G A G PT
Sbjct: 27 PGQPPQGWPGSNPW--NNPSAPSSVPSGLPPS-ATPSTVPFGPAPTGMYPSVPPTGPPPG 83
Query: 474 PPAPXXYPRPXLPXPXPXXAAXTXEAXTPXGRPPPXETLRSPXERXPR 617
PPAP P P P A T P G P T P PR
Sbjct: 84 PPAPFPPSGPSCPPPGGPYPAPTVPGPGPTG---PYPTPNMPFPELPR 128
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 33.1 bits (72), Expect = 2.0
Identities = 25/94 (26%), Positives = 30/94 (31%)
Frame = +1
Query: 658 PPPPNVXPXXRXVSGPSRAXXLPPXXQXPSASPPXRAHXXLGGXXTPPVXXHXTPXRATX 837
PPP N P G R PP + P+A+PP PP P
Sbjct: 292 PPPHNSGPPPPPARG--RGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPA 349
Query: 838 XLXXSXSTXEXXPXXLXTTASRAPRXXXRP*PPP 939
L + S P + AP P PPP
Sbjct: 350 LLSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPP 383
>AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22184 fis, clone HRC00983. ).
Length = 616
Score = 32.3 bits (70), Expect = 3.5
Identities = 30/140 (21%), Positives = 39/140 (27%)
Frame = +1
Query: 403 PPXXXRPXKPVPXRXXGPPXLXXPXQPRXDTRARPSPXPXXXXPPXLXRXTXXXXXXXXX 582
P P P PP P P P P P L
Sbjct: 76 PSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLS 135
Query: 583 XXSAPXKNAXLAPRXSXLAXLXXAXPPPPNVXPXXRXVSGPSRAXXLPPXXQXPSASPPX 762
+ P A P + L PPP+ P + P + + P PS +PP
Sbjct: 136 PLATPSPQA---PNALAVHLLQAPFSPPPS--PPVQAPFSPPASPPVSPSATPPSQAPPS 190
Query: 763 RAHXXLGGXXTPPVXXHXTP 822
A L +PP +P
Sbjct: 191 LAAPPLQVPPSPPASPPMSP 210
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 31.9 bits (69), Expect = 4.7
Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = +3
Query: 405 PXXXSAGKAGSXAXXRPTXAGXSPPAPXXYPRPXLPXPXPXXAAXTXEAXTPXGRPPPXE 584
P G G+ P A PP P P P P P P + P PPP
Sbjct: 48 PPPPPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPPPPPPSPGASYPPPQPPPPPPL 107
Query: 585 TLR-SPXERXP 614
R SP + P
Sbjct: 108 YQRVSPPQPPP 118
>AK090519-1|BAC03470.1| 464|Homo sapiens protein ( Homo sapiens
cDNA FLJ33200 fis, clone ADRGL2006677, weakly similar to
Elastin microfibril interface located protein. ).
Length = 464
Score = 31.9 bits (69), Expect = 4.7
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 450 RPTXAGXSPPAPXXYPR-PXLPXPXPXXAAXTXEAXTPXGRPPPXETLRSPXERXPR 617
+P+ SPP P P+ P P P P + A P RP + R P ER P+
Sbjct: 194 QPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQ--RPPEERPPQ 248
>AF270513-1|AAK37963.1| 1053|Homo sapiens extracellular glycoprotein
EMILIN-2 precursor protein.
Length = 1053
Score = 31.9 bits (69), Expect = 4.7
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 450 RPTXAGXSPPAPXXYPR-PXLPXPXPXXAAXTXEAXTPXGRPPPXETLRSPXERXPR 617
+P+ SPP P P+ P P P P + A P RP + R P ER P+
Sbjct: 783 QPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQ--RPPEERPPQ 837
>BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein.
Length = 183
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +1
Query: 658 PPPPNVXPXXRXVSGPSRAXXLPPXXQXPSASPPXRAHXXLGGXXTPP 801
PPPP P R G +++ PP P PP + G PP
Sbjct: 71 PPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGKPQGPP 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,007,982
Number of Sequences: 237096
Number of extensions: 1951607
Number of successful extensions: 9032
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8235
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16568915230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -