Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_K08
(1181 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.39
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.39
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.39
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.69
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.91
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.91
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.91
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 6.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.39
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 628 SXLAXLXXAXPPPPNVXPXXRXVSGPSRAXXLPPXXQXPSASPPXRAHXXLGGXXTPP 801
S L + PPPP + P P LPP P PP + G PP
Sbjct: 704 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.39
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 628 SXLAXLXXAXPPPPNVXPXXRXVSGPSRAXXLPPXXQXPSASPPXRAHXXLGGXXTPP 801
S L + PPPP + P P LPP P PP + G PP
Sbjct: 704 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.39
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 628 SXLAXLXXAXPPPPNVXPXXRXVSGPSRAXXLPPXXQXPSASPPXRAHXXLGGXXTPP 801
S L + PPPP + P P LPP P PP + G PP
Sbjct: 287 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.69
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 652 AXPPPPNVXPXXRXV--SGPSRAXXLPPXXQXPSASPPXR 765
A PPPP+ P + +GPS + PP P+ PP R
Sbjct: 440 APPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSR 479
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.91
Identities = 25/78 (32%), Positives = 27/78 (34%)
Frame = +3
Query: 390 PSDXSPXXXSAGKAGSXAXXRPTXAGXSPPAPXXYPRPXLPXPXPXXAAXTXEAXTPXGR 569
P P S AGS + P AG PP PR P P P + A G
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPP-----PRTGSPPPPPTGSPPPPPA---GGS 288
Query: 570 PPPXETLRSPXERXPRXS 623
PPP P PR S
Sbjct: 289 PPPPRAGSPPPPPPPRGS 306
Score = 29.5 bits (63), Expect = 4.8
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 453 PTXAGXSPPAPXXYPRPXLPXPXPXXAAXTXEAXTP--XGRPPPXETLRSP 599
P AG SPP P P P P P + T P G PPP T P
Sbjct: 282 PPPAGGSPPPPRAGSPP--PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Score = 28.7 bits (61), Expect = 8.5
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +3
Query: 390 PSDXSPXXXSAGKAGSXAXXRPTXAGXSPPAPXXYPRPXL-PXPXPXXAAXTXEAXTPXG 566
P SP AG GS P AG PP P P P P A T
Sbjct: 275 PPTGSPPPPPAG--GSPP---PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
Query: 567 RPPPXETLRSPXERXPRXS 623
PPP + ++P P S
Sbjct: 330 PPPPRQKRQAPERSPPTGS 348
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.91
Identities = 25/78 (32%), Positives = 27/78 (34%)
Frame = +3
Query: 390 PSDXSPXXXSAGKAGSXAXXRPTXAGXSPPAPXXYPRPXLPXPXPXXAAXTXEAXTPXGR 569
P P S AGS + P AG PP PR P P P + A G
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPP-----PRTGSPPPPPTGSPPPPPA---GGS 309
Query: 570 PPPXETLRSPXERXPRXS 623
PPP P PR S
Sbjct: 310 PPPPRAGSPPPPPPPRGS 327
Score = 29.5 bits (63), Expect = 4.8
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 453 PTXAGXSPPAPXXYPRPXLPXPXPXXAAXTXEAXTP--XGRPPPXETLRSP 599
P AG SPP P P P P P + T P G PPP T P
Sbjct: 303 PPPAGGSPPPPRAGSPP--PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Score = 28.7 bits (61), Expect = 8.5
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +3
Query: 390 PSDXSPXXXSAGKAGSXAXXRPTXAGXSPPAPXXYPRPXL-PXPXPXXAAXTXEAXTPXG 566
P SP AG GS P AG PP P P P P A T
Sbjct: 296 PPTGSPPPPPAG--GSPP---PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
Query: 567 RPPPXETLRSPXERXPRXS 623
PPP + ++P P S
Sbjct: 351 PPPPRQKRQAPERSPPTGS 369
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.91
Identities = 25/78 (32%), Positives = 27/78 (34%)
Frame = +3
Query: 390 PSDXSPXXXSAGKAGSXAXXRPTXAGXSPPAPXXYPRPXLPXPXPXXAAXTXEAXTPXGR 569
P P S AGS + P AG PP PR P P P + A G
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPP-----PRTGSPPPPPTGSPPPPPA---GGS 294
Query: 570 PPPXETLRSPXERXPRXS 623
PPP P PR S
Sbjct: 295 PPPPRAGSPPPPPPPRGS 312
Score = 29.5 bits (63), Expect = 4.8
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 453 PTXAGXSPPAPXXYPRPXLPXPXPXXAAXTXEAXTP--XGRPPPXETLRSP 599
P AG SPP P P P P P + T P G PPP T P
Sbjct: 288 PPPAGGSPPPPRAGSPP--PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Score = 28.7 bits (61), Expect = 8.5
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +3
Query: 390 PSDXSPXXXSAGKAGSXAXXRPTXAGXSPPAPXXYPRPXL-PXPXPXXAAXTXEAXTPXG 566
P SP AG GS P AG PP P P P P A T
Sbjct: 281 PPTGSPPPPPAG--GSPP---PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
Query: 567 RPPPXETLRSPXERXPRXS 623
PPP + ++P P S
Sbjct: 336 PPPPRQKRQAPERSPPTGS 354
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Frame = +1
Query: 394 RTAPPXXXRPXKPV---PXRXXGPPXLXXPXQPRXDTRARPSPXPXXXXPPXL 543
RT PP P +P P PP +PR R PSP P PP L
Sbjct: 148 RTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIP--PPPPRL 198
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.8
Identities = 36/134 (26%), Positives = 36/134 (26%), Gaps = 1/134 (0%)
Frame = -1
Query: 800 GGVXXPPRXXCARXGGEAEGXCXXGGXXXARDGPETXRXXGXTLGGGGXAXXSXARXEXR 621
GG PP C G G C GG P G GGGG
Sbjct: 45 GGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP-----CGGGCGGGGGGCGGGGGGCGG 99
Query: 620 GARXAFXWGAEGLXXXXXXXXGVXLXSXGGXXXXGXGEGRARVSXRGWXGXXSXG-GPXX 444
G G G G GG G G G S G G S G G
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Query: 443 RXGTGFXGRXXXGG 402
G G G GG
Sbjct: 160 GGGCGGGGGGGCGG 173
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.8
Identities = 36/134 (26%), Positives = 36/134 (26%), Gaps = 1/134 (0%)
Frame = -1
Query: 800 GGVXXPPRXXCARXGGEAEGXCXXGGXXXARDGPETXRXXGXTLGGGGXAXXSXARXEXR 621
GG PP C G G C GG P G GGGG
Sbjct: 45 GGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP-----CGGGCGGGGGGCGGGGGGCGG 99
Query: 620 GARXAFXWGAEGLXXXXXXXXGVXLXSXGGXXXXGXGEGRARVSXRGWXGXXSXG-GPXX 444
G G G G GG G G G S G G S G G
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Query: 443 RXGTGFXGRXXXGG 402
G G G GG
Sbjct: 160 GGGCGGGGGGGCGG 173
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.1 bits (62), Expect = 6.4
Identities = 34/143 (23%), Positives = 40/143 (27%), Gaps = 8/143 (5%)
Frame = -1
Query: 758 GGEAEGXCXXGGXXXARDGPETXRXXGXTLGGGGXAXXSXARXEXRGARXAFXWGAEGLX 579
G +A GG R G G G GG S + WG +
Sbjct: 40 GSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGG 99
Query: 578 XXXXXXXGVXLXSXGGXXXXGXGEGR--ARVSXRGW----XGXXSXGGPXXRXG--TGFX 423
G S GG G R + GW G + GG G G
Sbjct: 100 SSAGGWGGSQGGSQGGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQGGQNGGG 159
Query: 422 GRXXXGGAVRWAXXRXXKSXPGW 354
GR GG W + S GW
Sbjct: 160 GRGGSGGQGGWGGSQDGGSQGGW 182
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 453 PTXAGXSP-PAPXXYPRPXLPXPXPXXAAXTXEAXTPXGRPPP 578
P A +P P P YP+ +P P P A+ A P PPP
Sbjct: 58 PQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNA-VPVPAPPP 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,540,475
Number of Sequences: 27780
Number of extensions: 240128
Number of successful extensions: 1041
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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