Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_K07
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 137 1e-32
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 124 1e-28
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 123 2e-28
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 122 4e-28
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 36 0.057
05_03_0678 - 16871481-16871620,16871836-16871881,16872170-168722... 35 0.076
08_02_0381 - 16518670-16518726,16518841-16518941,16519030-165192... 33 0.23
08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004 29 6.6
08_01_0170 - 1440908-1441072,1441539-1441581,1442155-1442619,144... 29 6.6
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020... 29 6.6
12_01_0337 - 2591689-2593839 28 8.7
04_01_0174 - 1960817-1960830,1962052-1962108,1962255-1962324,196... 28 8.7
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 137 bits (332), Expect = 1e-32
Identities = 66/131 (50%), Positives = 85/131 (64%)
Frame = +2
Query: 281 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 460
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 461 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQXPV 640
M+VC+LGD QH +EA+ + + M SE++IKQ P
Sbjct: 62 MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 641 LLGPGLNKAGK 673
LLGPGLNKAGK
Sbjct: 122 LLGPGLNKAGK 132
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 684 LLSHQESMTQKIDEVKGXXKFQIEE 758
L++HQES+ K++E K KFQ+++
Sbjct: 158 LVTHQESLESKVNETKATVKFQLKK 182
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 124 bits (299), Expect = 1e-28
Identities = 59/125 (47%), Positives = 79/125 (63%)
Frame = +2
Query: 281 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 460
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 461 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQXPV 640
++VC+LGD QH +EA+ + + M SE++IKQ P
Sbjct: 62 LKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 641 LLGPG 655
LLGPG
Sbjct: 122 LLGPG 126
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 684 LLSHQESMTQKIDEVKGXXKFQIEE 758
L++HQES+ K++E K KFQ+++
Sbjct: 131 LVTHQESLESKVNETKATVKFQLKK 155
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 123 bits (296), Expect = 2e-28
Identities = 61/125 (48%), Positives = 77/125 (61%)
Frame = +2
Query: 281 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 460
SK+ + L E ++ V+ K+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQTEALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 461 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQXPV 640
M+VC+LGD QH +EA+ + + M SE++IKQ P
Sbjct: 62 MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 641 LLGPG 655
LLGPG
Sbjct: 122 LLGPG 126
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 684 LLSHQESMTQKIDEVKGXXKFQIEE 758
L++HQES+ K++E K KFQ+++
Sbjct: 131 LVTHQESLESKVNETKATVKFQLKK 155
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 122 bits (294), Expect = 4e-28
Identities = 61/124 (49%), Positives = 77/124 (62%)
Frame = +2
Query: 284 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 463
K+ + L E ++ V+ SK+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 21 KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 80
Query: 464 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQXPVL 643
+VC+LGD QH +EA+ + + M SE++IKQ P L
Sbjct: 81 KVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 140
Query: 644 LGPG 655
LGPG
Sbjct: 141 LGPG 144
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 684 LLSHQESMTQKIDEVKGXXKFQIEE 758
L++HQES+ K++E K KFQ+++
Sbjct: 149 LVTHQESLESKVNETKATVKFQLKK 173
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 35.5 bits (78), Expect = 0.057
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 332 SSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAK 508
S+ +KKRNF ETVE + L DP++ D+ G + L + ++V V + DEA+
Sbjct: 279 SANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPAADEAR 337
>05_03_0678 -
16871481-16871620,16871836-16871881,16872170-16872243,
16872495-16872552,16872640-16872702,16872891-16873012,
16873132-16873247,16873367-16873428,16873497-16873589,
16874061-16874138,16874248-16874423,16874500-16874550,
16874964-16875078
Length = 397
Score = 35.1 bits (77), Expect = 0.076
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 257 GSLTNKMSSKVSRDTLYECVNAVLQSSKDKK-RNFLETVELQIGLKNYDPQKDKRFSGTV 433
G+ + +S + T +E + + LQS K K R +E + D + K + +
Sbjct: 242 GNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLL 301
Query: 434 KLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 529
K + PK +VCV D +CD+ VP +
Sbjct: 302 KAPFCIHPKTGRVCVPIDPNNCDDFDPTTVPTL 334
>08_02_0381 -
16518670-16518726,16518841-16518941,16519030-16519200,
16519498-16519672,16519787-16519887,16520247-16520358,
16520522-16521055,16521966-16522056,16523403-16523590,
16523676-16523960
Length = 604
Score = 33.5 bits (73), Expect = 0.23
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 179 LVSLVFLSFISGPGSVLLQLPSVVIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDK 346
L LVF +F + P V+LQL + G L N+ + +D L C VL + DK
Sbjct: 487 LSKLVFNNFCTVPAKVVLQLTTAFREGGLCNRTETFSYKDHLRYCQTPVLALAGDK 542
>08_01_0171 - 1447782-1447935,1448016-1448480,1448578-1450004
Length = 681
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
Frame = -2
Query: 184 YQLTFWFFSSSRSFLQK-------PRPPKKP 113
+QLT W+F SS SF QK P PP P
Sbjct: 253 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 283
>08_01_0170 -
1440908-1441072,1441539-1441581,1442155-1442619,
1442714-1444149
Length = 702
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
Frame = -2
Query: 184 YQLTFWFFSSSRSFLQK-------PRPPKKP 113
+QLT W+F SS SF QK P PP P
Sbjct: 256 HQLTSWYFKSSSSFEQKLAAKVASPPPPSSP 286
>03_02_0829 -
11599665-11600364,11600853-11601076,11601786-11602000,
11602300-11602377,11602593-11603907
Length = 843
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 431 QCRRNACPSVGHSSSDQFEALQSPKS 354
Q RN PS+ H +SD F + SP S
Sbjct: 81 QKSRNLSPSISHQASDSFSPVPSPLS 106
>12_01_0337 - 2591689-2593839
Length = 716
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 6 VSHLPPXXIGXTTFFXXYCRRPEAASA 86
VS LPP + T F YCRR SA
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGNLYSA 601
>04_01_0174 -
1960817-1960830,1962052-1962108,1962255-1962324,
1962352-1962501,1964338-1964487,1964751-1964798,
1964930-1964956,1965243-1965319,1965423-1965525,
1966399-1966529,1967499-1967676,1968886-1968945
Length = 354
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 823 SGARSSGSHVPHGQLLQKDTTPS-SIWNLXXPLTSSIFCVMD 701
SGA+ SG+ +PHG + P W L + FC +D
Sbjct: 55 SGAQGSGNDIPHGYIWSPHLVPKPKDWGLKIDVVG--FCFLD 94
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,265,152
Number of Sequences: 37544
Number of extensions: 435965
Number of successful extensions: 1101
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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