Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_K02
         (820 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0150 - 15150169-15150228,15150294-15150529,15151844-151520...   116   3e-26
03_05_1076 + 30180923-30181150,30181746-30181913,30182063-301822...   113   2e-25

>09_04_0150 -
           15150169-15150228,15150294-15150529,15151844-15152063,
           15152218-15152385,15152969-15153214
          Length = 309

 Score =  116 bits (278), Expect = 3e-26
 Identities = 62/137 (45%), Positives = 88/137 (64%), Gaps = 3/137 (2%)
 Frame = +1

Query: 241 VLQPSQDLP-AETPIVAGYDWEN-GTDYNKILESYANSGFQATNFGKTVVEINNMLKSR- 411
           VL+PS+ L       +AG D+ + G   + +L S A +GFQA+N G  V  +N ML+ R 
Sbjct: 28  VLKPSESLDEGRFTRIAGADFNDAGLGLSGMLASLATTGFQASNLGDAVDVVNQMLEWRL 87

Query: 412 AVPLTEENSDCYEEDQFIKKKTNCTIFLGYTSNMISSGLRDTIRFLIKNKLVDVIVTTAG 591
           +     E+ D  E D   ++   C IFLG+TSN++SSG+RD +RFL+++ +VDVIVTTAG
Sbjct: 88  SHEKPREDCDEPELDPTYRESVKCKIFLGFTSNLVSSGIRDVVRFLVQHHMVDVIVTTAG 147

Query: 592 GIXEXLXKCIXPTFXGD 642
           GI E L KC+ PT+ GD
Sbjct: 148 GIEEDLIKCLAPTYRGD 164


>03_05_1076 +
           30180923-30181150,30181746-30181913,30182063-30182281,
           30182827-30182872,30183708-30183943,30184065-30184079,
           30185749-30186061,30186189-30186403,30186598-30186600
          Length = 480

 Score =  113 bits (271), Expect = 2e-25
 Identities = 61/137 (44%), Positives = 86/137 (62%), Gaps = 3/137 (2%)
 Frame = +1

Query: 241 VLQPSQDLP-AETPIVAGYDWEN-GTDYNKILESYANSGFQATNFGKTVVEINNMLKSR- 411
           VL+PS+ L       +AG D+ + G     +L S A +GFQA+N G  V  +N ML  R 
Sbjct: 22  VLKPSESLDEGRFTRIAGADFNDAGLGLPGLLASLATTGFQASNLGDAVDVVNQMLDWRL 81

Query: 412 AVPLTEENSDCYEEDQFIKKKTNCTIFLGYTSNMISSGLRDTIRFLIKNKLVDVIVTTAG 591
           +     E+ D  E D   ++   C IFLG+TSN++SSG+RD +RFL+++ +VDVIVTTAG
Sbjct: 82  SHEKPREDCDEAELDPTYRESVKCKIFLGFTSNLVSSGIRDVVRFLVQHHMVDVIVTTAG 141

Query: 592 GIXEXLXKCIXPTFXGD 642
           GI E L KC+ PT+ G+
Sbjct: 142 GIEEDLIKCLAPTYRGE 158


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,287,122
Number of Sequences: 37544
Number of extensions: 290788
Number of successful extensions: 691
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)