Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_K02
         (820 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023828-6|CAA19451.1|  371|Caenorhabditis elegans Hypothetical ...   115   5e-26
AF003390-2|AAP31432.1|  341|Caenorhabditis elegans Hypothetical ...    31   0.75 
AF003390-1|AAB54271.2|  473|Caenorhabditis elegans Hypothetical ...    31   0.75 
Z68121-1|CAA92204.2|  174|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF302237-1|AAG21385.1|  174|Caenorhabditis elegans GATA-type tra...    29   3.0  
U00044-5|AAK93857.1|  174|Caenorhabditis elegans Mesoderm and en...    29   4.0  
AF302238-1|AAG21386.1|  174|Caenorhabditis elegans GATA-type tra...    29   4.0  
Z83110-6|CAB05528.3|  545|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z81462-8|CAB03846.3|  545|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF038608-2|AAU05595.1|  297|Caenorhabditis elegans Serpentine re...    28   7.0  

>AL023828-6|CAA19451.1|  371|Caenorhabditis elegans Hypothetical
           protein Y17G7B.4 protein.
          Length = 371

 Score =  115 bits (276), Expect = 5e-26
 Identities = 58/142 (40%), Positives = 92/142 (64%), Gaps = 4/142 (2%)
 Frame = +1

Query: 226 IAVNAVLQPSQDLPAETPIVAGYDWE--NGTDYN--KILESYANSGFQATNFGKTVVEIN 393
           +A  AVL  S  +P  +  + G+D+   +G D++   IL SY ++GFQAT+  + + ++N
Sbjct: 15  LAQGAVLVKSCQVPDGSIPIRGFDFSTASGPDFSLSAILSSYMSTGFQATHLAQAIQQVN 74

Query: 394 NMLKSRAVPLTEENSDCYEEDQFIKKKTNCTIFLGYTSNMISSGLRDTIRFLIKNKLVDV 573
            ML  R  PLT ++ +        ++K +CTIFLGYTSN+++SGLR+ +R+ ++  LVD 
Sbjct: 75  QMLSLRDTPLTCDDDEKLFPYPEGRQKRSCTIFLGYTSNLVTSGLREVLRYCVQRNLVDC 134

Query: 574 IVTTAGGIXEXLXKCIXPTFXG 639
           IVT+AGGI E L KC+ P++ G
Sbjct: 135 IVTSAGGIEEDLIKCLKPSYLG 156


>AF003390-2|AAP31432.1|  341|Caenorhabditis elegans Hypothetical
           protein R155.1b protein.
          Length = 341

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 298 WENGTDYNKILESY--ANSGFQATNFGKTVVEINNMLKSRAVPLT 426
           WE G DYN ++ES+    + F   +  + +  +NN L S  + L+
Sbjct: 169 WETGHDYNSVVESFNCGTNTFAKNHIHRRLRWVNNKLASHVITLS 213


>AF003390-1|AAB54271.2|  473|Caenorhabditis elegans Hypothetical
           protein R155.1a protein.
          Length = 473

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 298 WENGTDYNKILESY--ANSGFQATNFGKTVVEINNMLKSRAVPLT 426
           WE G DYN ++ES+    + F   +  + +  +NN L S  + L+
Sbjct: 301 WETGHDYNSVVESFNCGTNTFAKNHIHRRLRWVNNKLASHVITLS 345


>Z68121-1|CAA92204.2|  174|Caenorhabditis elegans Hypothetical
           protein T24D3.1 protein.
          Length = 174

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 222 WGYFNRFFDVARDFHSCFCYFPRSITHNTLNINQ---RPNRKYFNLINKFS 79
           + Y+N ++D    + S   Y+P ++  ++LNI+     PN  +F     FS
Sbjct: 40  YSYYNNYYDYVNTYAS---YYPTAMDSSSLNISSTTGSPNSSHFTTFTHFS 87


>AF302237-1|AAG21385.1|  174|Caenorhabditis elegans GATA-type
           transcription factor protein.
          Length = 174

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 222 WGYFNRFFDVARDFHSCFCYFPRSITHNTLNINQ---RPNRKYFNLINKFS 79
           + Y+N ++D    + S   Y+P ++  ++LNI+     PN  +F     FS
Sbjct: 40  YSYYNNYYDYVNTYAS---YYPTAMDSSSLNISSTTGSPNSSHFTTFTHFS 87


>U00044-5|AAK93857.1|  174|Caenorhabditis elegans Mesoderm and
           endoderm determinationprotein 2 protein.
          Length = 174

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 222 WGYFNRFFDVARDFHSCFCYFPRSITHNTLNINQ---RPNRKYFNLINKFS 79
           + Y+N ++D    + S   Y+P ++  ++LNI+     PN  +F     FS
Sbjct: 40  YSYYNNYYDYVNTYAS---YYPTAMDSSSLNISPTTGSPNSSHFTTFTHFS 87


>AF302238-1|AAG21386.1|  174|Caenorhabditis elegans GATA-type
           transcription factor protein.
          Length = 174

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -2

Query: 222 WGYFNRFFDVARDFHSCFCYFPRSITHNTLNINQ---RPNRKYFNLINKFS 79
           + Y+N ++D    + S   Y+P ++  ++LNI+     PN  +F     FS
Sbjct: 40  YSYYNNYYDYVNTYAS---YYPTAMDSSSLNISPTTGSPNSSHFTTFTHFS 87


>Z83110-6|CAB05528.3|  545|Caenorhabditis elegans Hypothetical
           protein F57C2.6 protein.
          Length = 545

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = +1

Query: 187 PCNVEKPVKVAPNIAVNAVLQPSQDLPAETPIVAGYDWENGTDYN---KILESYANSGFQ 357
           P   E+P K+ PN A +    P + +    P  +GYD ++ T      K+  S   S F 
Sbjct: 37  PIAAERPSKIFPNKARSGFKTPLRSINTTDPSTSGYDSKSITPQQNDPKLSMSAELSSFI 96

Query: 358 ATN 366
           A N
Sbjct: 97  ANN 99


>Z81462-8|CAB03846.3|  545|Caenorhabditis elegans Hypothetical
           protein F57C2.6 protein.
          Length = 545

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = +1

Query: 187 PCNVEKPVKVAPNIAVNAVLQPSQDLPAETPIVAGYDWENGTDYN---KILESYANSGFQ 357
           P   E+P K+ PN A +    P + +    P  +GYD ++ T      K+  S   S F 
Sbjct: 37  PIAAERPSKIFPNKARSGFKTPLRSINTTDPSTSGYDSKSITPQQNDPKLSMSAELSSFI 96

Query: 358 ATN 366
           A N
Sbjct: 97  ANN 99


>AF038608-2|AAU05595.1|  297|Caenorhabditis elegans Serpentine
           receptor, class z protein70 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +1

Query: 85  FIY*IKIFSIGTLIYIKGIMGN*SWKITKTAMEIPCNVEK 204
           FI  +  FSI  L+YI  I+G  +  I   ++ I CN++K
Sbjct: 240 FILFLPQFSIQLLVYIIAIIGGLTTPIIIESVYIVCNIDK 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,481,182
Number of Sequences: 27780
Number of extensions: 277138
Number of successful extensions: 795
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)