Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_J21
         (913 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    25   0.72 
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    25   0.72 
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    22   6.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   8.9  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 25.4 bits (53), Expect = 0.72
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = +2

Query: 734 PPVPDPARLPEYLFP---PFSPSGKXWP 808
           P VP P R P   FP   PF+P  K WP
Sbjct: 24  PNVPQPGRRPFPTFPGQGPFNPKIK-WP 50


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 25.4 bits (53), Expect = 0.72
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +3

Query: 675 NPTGL*RY--QAFPP--GKLPRCALLFPTLPAYRNTC 773
           NP G  RY   AFP   GK    A++ PTLP Y+  C
Sbjct: 6   NPKGKKRYITAAFPSACGKT-NLAMMKPTLPGYKIEC 41


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
 Frame = +2

Query: 734 PPVPDPARLPEYLFP---PFSP 790
           P VP P R P   FP   PF+P
Sbjct: 10  PNVPQPGRRPFPTFPGQGPFNP 31


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = -2

Query: 690 IVLSGFATSDLSVDFCDARPGGRSLWKNASNAAFLRXL 577
           ++   +A  D+  + CD +PG     K       L+ L
Sbjct: 478 VMAFAYAFRDMHKELCDGKPGLCDAMKPTKGTELLKYL 515


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,996
Number of Sequences: 438
Number of extensions: 3978
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)