Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_J16
         (849 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024847-3|AAF60854.1|  195|Caenorhabditis elegans Hypothetical ...   113   1e-25
AC024847-2|AAO21415.1|  197|Caenorhabditis elegans Hypothetical ...   113   1e-25
U29488-6|AAA68776.1|  161|Caenorhabditis elegans Inhibitor of ce...    33   0.34 
AL031633-22|CAB97238.1|  512|Caenorhabditis elegans Hypothetical...    30   2.4  
AJ582072-1|CAE46542.1|  512|Caenorhabditis elegans flavin monoox...    30   2.4  
AJ582073-1|CAE46543.1|  518|Caenorhabditis elegans flavin monoox...    29   5.5  
AC006663-1|AAF39901.1|  518|Caenorhabditis elegans Flavin-contai...    29   5.5  

>AC024847-3|AAF60854.1|  195|Caenorhabditis elegans Hypothetical
           protein Y65B4BR.5a protein.
          Length = 195

 Score =  113 bits (273), Expect = 1e-25
 Identities = 56/78 (71%), Positives = 63/78 (80%)
 Frame = +2

Query: 338 GIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDT 517
           G  I  ++KQSR EKKARK+ SKLGLK V GV RV IRKSKNILFVIN PDV+K+P SDT
Sbjct: 46  GDHIDKQAKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDT 105

Query: 518 YIVFGEAKIEDLSTQATM 571
           YI+FGEAKIEDL+  A M
Sbjct: 106 YIIFGEAKIEDLTQHAQM 123



 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = +1

Query: 718 IVMSQANVSRAKAVRALK 771
           +V+SQAN +R KA+RALK
Sbjct: 163 LVISQANTTRNKAIRALK 180


>AC024847-2|AAO21415.1|  197|Caenorhabditis elegans Hypothetical
           protein Y65B4BR.5b protein.
          Length = 197

 Score =  113 bits (273), Expect = 1e-25
 Identities = 56/78 (71%), Positives = 63/78 (80%)
 Frame = +2

Query: 338 GIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDT 517
           G  I  ++KQSR EKKARK+ SKLGLK V GV RV IRKSKNILFVIN PDV+K+P SDT
Sbjct: 46  GDHIDKQAKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDT 105

Query: 518 YIVFGEAKIEDLSTQATM 571
           YI+FGEAKIEDL+  A M
Sbjct: 106 YIIFGEAKIEDLTQHAQM 123



 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = +1

Query: 718 IVMSQANVSRAKAVRALK 771
           +V+SQAN +R KA+RALK
Sbjct: 165 LVISQANTTRNKAIRALK 182


>U29488-6|AAA68776.1|  161|Caenorhabditis elegans Inhibitor of cell
           death protein 1 protein.
          Length = 161

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 19/75 (25%), Positives = 36/75 (48%)
 Frame = +2

Query: 314 GGITNPIAGIDIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDV 493
           GG   P     ++ K+  +  +KK +  + KL +  + G+E V + K    +   N+P V
Sbjct: 23  GGKGTPRRKKKVIHKTAAA-DDKKLQSNLKKLSVTNIPGIEEVNMIKDDGTVIHFNNPKV 81

Query: 494 YKNPHSDTYIVFGEA 538
             +  ++T+ V G A
Sbjct: 82  QTSVPANTFSVTGSA 96


>AL031633-22|CAB97238.1|  512|Caenorhabditis elegans Hypothetical
           protein Y39A1A.19 protein.
          Length = 512

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +3

Query: 555 PHRP-PWAAAERFKGTRNHSH 614
           PH P PW   E+FKG   HSH
Sbjct: 157 PHIPKPWPGQEKFKGRITHSH 177


>AJ582072-1|CAE46542.1|  512|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 512

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +3

Query: 555 PHRP-PWAAAERFKGTRNHSH 614
           PH P PW   E+FKG   HSH
Sbjct: 157 PHIPKPWPGQEKFKGRITHSH 177


>AJ582073-1|CAE46543.1|  518|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +3

Query: 555 PHRP-PWAAAERFKGTRNHSH 614
           PH P PW   E+FKG   HSH
Sbjct: 156 PHIPEPWPGQEKFKGRIIHSH 176


>AC006663-1|AAF39901.1|  518|Caenorhabditis elegans
           Flavin-containing monooxygenasefamily protein 5 protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +3

Query: 555 PHRP-PWAAAERFKGTRNHSH 614
           PH P PW   E+FKG   HSH
Sbjct: 156 PHIPEPWPGQEKFKGRIIHSH 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,192,916
Number of Sequences: 27780
Number of extensions: 281190
Number of successful extensions: 805
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)