Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_J14
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical ...   311   4e-85
AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical ...   115   4e-26
AC084159-6|AAK39360.1|   97|Caenorhabditis elegans Hypothetical ...    42   6e-04
Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    31   0.81 
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    29   3.3  
L25598-7|AAA27938.3|  436|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical pr...    28   10.0 
AF067214-8|AAC17008.1|   69|Caenorhabditis elegans Hypothetical ...    28   10.0 

>AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8a protein.
          Length = 319

 Score =  311 bits (764), Expect = 4e-85
 Identities = 154/246 (62%), Positives = 193/246 (78%), Gaps = 2/246 (0%)
 Frame = +3

Query: 87  MSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKD 266
           MS L+QLK  S VVADTGDF A+KE++PTDATTNPSLIL+A+ MEQY  ++D+++ Y K+
Sbjct: 1   MSVLEQLKGASVVVADTGDFNAIKEFQPTDATTNPSLILAASKMEQYAALIDQSVAYAKE 60

Query: 267 NGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAE 446
           + S  +E +   +D L V+FG EILK IPGRVS EVDARLSFD  ASI +A+  I  + +
Sbjct: 61  HASGHQEVLQAAMDRLFVVFGKEILKTIPGRVSTEVDARLSFDTQASIDRALGLIAQYEK 120

Query: 447 HGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEANVTLISPFVG 626
            GI K+RILIKLASTWEGI+AAK LE KHGIHCN+TLLF+  QA+ACAE+ VTLISPFVG
Sbjct: 121 EGISKDRILIKLASTWEGIRAAKFLESKHGIHCNMTLLFNFEQAVACAESGVTLISPFVG 180

Query: 627 RILDWYVEHT-KKTYEGKEDPGVVSVTKL-QLLQEVWLQDQVMGASFRNTGEIRELXGCD 800
           RI+DW+V++T +K Y  K+DPGVVSVT++    ++   + QVM ASFRNT EI+ L GCD
Sbjct: 181 RIMDWFVKNTDQKAYTRKDDPGVVSVTRIFNYYKKYDYKTQVMAASFRNTEEIKGLVGCD 240

Query: 801 LLTISP 818
           LLTISP
Sbjct: 241 LLTISP 246


>AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8b protein.
          Length = 165

 Score =  115 bits (277), Expect = 4e-26
 Identities = 57/92 (61%), Positives = 73/92 (79%), Gaps = 2/92 (2%)
 Frame = +3

Query: 549 LTLLFSLYQAIACAEANVTLISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKL-QLLQ 722
           +TLLF+  QA+ACAE+ VTLISPFVGRI+DW+V++T +K Y  K+DPGVVSVT++    +
Sbjct: 1   MTLLFNFEQAVACAESGVTLISPFVGRIMDWFVKNTDQKAYTRKDDPGVVSVTRIFNYYK 60

Query: 723 EVWLQDQVMGASFRNTGEIRELXGCDLLTISP 818
           +   + QVM ASFRNT EI+ L GCDLLTISP
Sbjct: 61  KYDYKTQVMAASFRNTEEIKGLVGCDLLTISP 92


>AC084159-6|AAK39360.1|   97|Caenorhabditis elegans Hypothetical
           protein Y73B3A.2 protein.
          Length = 97

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +3

Query: 747 MGASFRNTGEIRELXGCDLLTISP 818
           M ASFRNT EI+ L GCDLLTISP
Sbjct: 1   MAASFRNTEEIKGLVGCDLLTISP 24


>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +3

Query: 264 DNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSV-EVDARLSFDKDASIAKAIKFINLF 440
           D  S++ E++ E    ++++      +    +V + E  A+L+ +KD  I K  + I L 
Sbjct: 218 DPSSTMNEELTELRSQMNLIIEYNEKQETVWQVKLSEASAQLN-EKDLVIEKITRKIELL 276

Query: 441 AEHGIKKERILIKLASTWEGIQAAKELEK 527
            E+ +KK++ + +L   +E     K L+K
Sbjct: 277 QENNVKKDQRIYELEQCFESEDYCKILQK 305


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
            interacting proteinprotein 1 protein.
          Length = 2153

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = -1

Query: 808  VSKSQPXNSRISPVLRKDAPITWSCNQTSCNSCNFVTETTPGSSLPS*VFFVCSTYQSNI 629
            VS   P  S +SP++   +PI  + + T     +  T  TP +     V    +T QS  
Sbjct: 2071 VSTLSPIVSTLSPIVSTLSPIVSTLSPTVSTLSSNATSLTPSNP----VLVSTATTQSPA 2126

Query: 628  RPTNGDISVTFA 593
              T G  S+TF+
Sbjct: 2127 TTTKGSSSITFS 2138


>L25598-7|AAA27938.3|  436|Caenorhabditis elegans Hypothetical
           protein C06G4.5 protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +3

Query: 468 ILIKLASTWEGIQAAKELEK-KHGIHCNLTLLFSLYQAIACAEANVTLISPFVGRILDWY 644
           I++    T  G+    ++EK    I   +   F++YQ I C    + LI+ F  ++L   
Sbjct: 200 IILYAKETAPGMLTRMKIEKCTVDIDSQMFTAFTIYQFILCYCTPLVLIAFFYTKLLSKL 259

Query: 645 VEHTKKTYEGKEDP 686
            EHT +T++  + P
Sbjct: 260 REHT-RTFKSSQIP 272


>U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical
           protein T25G12.5 protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
 Frame = +3

Query: 147 EAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDN---GSSIEEQVAETLDMLS 317
           E  K    T   T P++   A G+      LD A +Y  +    G+ I      +  +  
Sbjct: 255 EGFKVAMKTFDKTRPTVAALATGVAY--RCLDVATQYSLERKAFGTQIANHQGVSFLLAE 312

Query: 318 VLFGCEILKIIPGRVSVEVDARLSFDKDASIAK 416
           +   CE+ +++  +   EVDA       ASIAK
Sbjct: 313 MAINCELARLMTYKSGAEVDAGRPGSYYASIAK 345


>AF067214-8|AAC17008.1|   69|Caenorhabditis elegans Hypothetical
           protein F56C3.8 protein.
          Length = 69

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 460 FLIPCSANKLINLIAFAMLASLSNDNLASTSTDTRPGIIFNI 335
           F++    N ++ LI      SL +D L   +TD +PG++  +
Sbjct: 5   FIVTKMKNTVLLLILALFFISLRDDGLQMPNTDLKPGLLMQM 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,335,458
Number of Sequences: 27780
Number of extensions: 422462
Number of successful extensions: 1216
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)