Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_J12
(899 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 442 e-124
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 442 e-124
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 442 e-124
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 442 e-124
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 442 e-124
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 442 e-124
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 442 e-124
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 442 e-124
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 442 e-124
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 440 e-124
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 423 e-119
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 260 1e-69
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 249 2e-66
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 171 4e-43
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 118 8e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 1e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 69 3e-12
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 68 8e-12
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.64
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.85
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.85
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.85
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.6
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 7.9
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 442 bits (1089), Expect = e-124
Identities = 207/218 (94%), Positives = 213/218 (97%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 786 FEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPEA 899
FEQEM T +S+SLEKSYELPDGQVI +GN RFRCPEA
Sbjct: 224 FEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 442 bits (1089), Expect = e-124
Identities = 207/218 (94%), Positives = 213/218 (97%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 786 FEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPEA 899
FEQEM T +S+SLEKSYELPDGQVI +GN RFRCPEA
Sbjct: 224 FEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Score = 95.9 bits (228), Expect = 3e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 442 bits (1088), Expect = e-124
Identities = 206/218 (94%), Positives = 213/218 (97%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 786 FEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPEA 899
FEQEM T +S+SLEKSYELPDGQVI +GN RFRCPEA
Sbjct: 224 FEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 442 bits (1088), Expect = e-124
Identities = 206/218 (94%), Positives = 213/218 (97%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 786 FEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPEA 899
FEQEM T +S+SLEKSYELPDGQVI +GN RFRCPEA
Sbjct: 224 FEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 442 bits (1088), Expect = e-124
Identities = 206/218 (94%), Positives = 213/218 (97%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 786 FEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPEA 899
FEQEM T +S+SLEKSYELPDGQVI +GN RFRCPEA
Sbjct: 224 FEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 442 bits (1088), Expect = e-124
Identities = 206/218 (94%), Positives = 213/218 (97%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 786 FEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPEA 899
FEQEM T +S+SLEKSYELPDGQVI +GN RFRCPEA
Sbjct: 224 FEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 442 bits (1088), Expect = e-124
Identities = 206/218 (94%), Positives = 213/218 (97%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 786 FEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPEA 899
FEQEM T +S+SLEKSYELPDGQVI +GN RFRCPEA
Sbjct: 224 FEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 442 bits (1088), Expect = e-124
Identities = 206/218 (94%), Positives = 213/218 (97%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 90 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 149
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 150 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 209
Query: 786 FEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPEA 899
FEQEM T +S+SLEKSYELPDGQVI +GN RFRCPEA
Sbjct: 210 FEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 247
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 170 KAGFAGDDAPRAVFPSIVGRPRHQG 244
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 442 bits (1088), Expect = e-124
Identities = 206/218 (94%), Positives = 213/218 (97%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 786 FEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPEA 899
FEQEM T +S+SLEKSYELPDGQVI +GN RFRCPEA
Sbjct: 224 FEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 261
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 440 bits (1084), Expect = e-124
Identities = 205/217 (94%), Positives = 212/217 (97%)
Frame = +3
Query: 249 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 428
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 429 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 608
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 609 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 788
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 180
Query: 789 EQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPEA 899
EQEM T +S+SLEKSYELPDGQVI +GN RFRCPEA
Sbjct: 181 EQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEA 217
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 423 bits (1042), Expect = e-119
Identities = 196/217 (90%), Positives = 207/217 (95%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 425
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 426 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
VLLTEAPLNPK+NREKMTQIMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HT
Sbjct: 103 VLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT 162
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
VPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA D
Sbjct: 163 VPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHD 222
Query: 786 FEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPE 896
FE E+ +S+SLEKSYELPDGQVI IGN RFRCPE
Sbjct: 223 FESELAAAASSSSLEKSYELPDGQVITIGNERFRCPE 259
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = +2
Query: 122 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 260 bits (636), Expect = 1e-69
Identities = 121/218 (55%), Positives = 159/218 (72%), Gaps = 1/218 (0%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 422
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 423 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
PVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H
Sbjct: 106 PVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTH 165
Query: 603 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 782
VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++KE CY+AL
Sbjct: 166 AVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLAL 225
Query: 783 DFEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPE 896
D T + S++ SY LPD I I N FR PE
Sbjct: 226 D-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPE 258
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +2
Query: 122 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 238
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 249 bits (610), Expect = 2e-66
Identities = 121/239 (50%), Positives = 163/239 (68%), Gaps = 1/239 (0%)
Frame = +3
Query: 183 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 362
PA P+ RP + +T+ V + KD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVG-NIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 363 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 539
M +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL
Sbjct: 85 MAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVL 144
Query: 540 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 719
+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F
Sbjct: 145 TLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNF 204
Query: 720 TTTAEREIVRDIKEKLCYVALDFEQEMXTXXASTSLEKSYELPDGQVIPIGNXRFRCPE 896
+A+ E VR +KEKLCY+A D EQE +T L + Y LPDG+VI +G RF PE
Sbjct: 205 NHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPE 263
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 140 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 232
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 171 bits (417), Expect = 4e-43
Identities = 83/193 (43%), Positives = 118/193 (61%), Gaps = 9/193 (4%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 422
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 423 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVL 578
LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVI 175
Query: 579 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 758
DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IK
Sbjct: 176 DSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIK 235
Query: 759 EKLCYVALDFEQE 797
EK CYV D +E
Sbjct: 236 EKFCYVCPDVMKE 248
Score = 35.5 bits (78), Expect = 0.052
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 223
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 118 bits (283), Expect = 8e-27
Identities = 52/126 (41%), Positives = 85/126 (67%)
Frame = +3
Query: 330 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 509
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 510 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 689
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 690 KILTER 707
++L ++
Sbjct: 214 QMLDQQ 219
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 125 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 223
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 374
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 365
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 374
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +2
Query: 116 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 244
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 95.1 bits (226), Expect = 6e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 246 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKI 374
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 69.3 bits (162), Expect = 3e-12
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Frame = +3
Query: 264 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 437
+K +V E + +L Y PIE G + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 438 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHT 605
+ A + ++I+F+ F ++ + L S + +V+DSG +
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTV 157
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQN 215
Query: 786 FEQEM---XTXXASTSLEKSYELPD 851
F++ M + K Y +PD
Sbjct: 216 FDESMKEARNRFQENTTMKRYIMPD 240
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 69.3 bits (162), Expect = 3e-12
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Frame = +3
Query: 264 QKDSYVGDEAQSKRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 437
+K +V E + +L Y PIE G + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 438 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHT 605
+ A + ++I+F+ F ++ + L S + +V+DSG +
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTV 157
Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 785
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQN 215
Query: 786 FEQEM---XTXXASTSLEKSYELPD 851
F++ M + K Y +PD
Sbjct: 216 FDESMKEARNRFQGNTTMKRYIMPD 240
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 68.1 bits (159), Expect = 8e-12
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 6/173 (3%)
Frame = +3
Query: 396 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 575
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 576 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 746
+D G+ V + VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 747 RDIKEKLCYVALDFEQEMXTXXAST--SLEKSYELPDGQV-IPIGNXRFRCPE 896
R E+ YV D+++E + T SL+ P Q I N RF C E
Sbjct: 385 RFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTE 437
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 595 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 500
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.85
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 147 STMAPACARPVSPATTRPAPSSRP 218
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.85
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 282 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 461
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 462 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 614
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 740 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 606
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 294 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 160
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 294 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 160
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 294 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 160
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 294 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 160
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 294 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 181
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 602 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 781
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 782 RLRAG 796
+ AG
Sbjct: 130 QTDAG 134
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -3
Query: 312 GYLSCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 160
G C P P P +P P G P G + +GA++P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +2
Query: 230 PRHQGRDGRYGPERL--LRG*RGPEQERYPHSEVPHRARYHH 349
PR G GR+GP G GP + P R +HH
Sbjct: 376 PRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +3
Query: 138 RL*STMAPACARPVSPATTRPAPSSRPSWVALATR 242
RL S +AP A P S A TR APS + VA R
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,022,794
Number of Sequences: 27780
Number of extensions: 413238
Number of successful extensions: 1797
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1780
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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