Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_J04
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708...    29   4.7  

>07_03_1647 + 28370226-28370369,28370452-28370611,28370704-28370831,
            28372512-28372628,28372729-28372782,28372985-28373075,
            28373517-28373688,28374452-28374573,28374726-28374817,
            28375331-28375373,28375596-28375656,28376367-28376515,
            28376659-28376729,28376805-28376975,28377056-28377124,
            28377427-28377528,28377629-28377697,28378060-28378138,
            28378238-28378337,28378438-28378513,28378715-28378894,
            28379430-28379552,28379634-28379717,28380068-28380252,
            28380339-28380477,28380585-28380644,28380926-28381030,
            28381332-28381445
          Length = 1019

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -2

Query: 155  SVVGSSLMTDVKHAAKKTPANXKSTDLNMTSLIQY 51
            S V S  M D KHA ++  A+  S   NMT LIQ+
Sbjct: 966  SDVRSLRMNDFKHAHEQVCASITSDSRNMTELIQW 1000


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,875,611
Number of Sequences: 37544
Number of extensions: 258208
Number of successful extensions: 468
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)