Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_I20
         (874 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026355-1|AAH26355.2|  723|Homo sapiens Bardet-Biedl syndrome 1...    32   3.1  
BC013795-1|AAH13795.1|  151|Homo sapiens BBS10 protein protein.        32   3.1  
AK027213-1|BAB15695.1|  151|Homo sapiens protein ( Homo sapiens ...    32   3.1  
Z82216-2|CAI43051.1|  595|Homo sapiens premature ovarian failure...    31   7.2  
Z82216-1|CAI43050.1|  589|Homo sapiens premature ovarian failure...    31   7.2  
BC017500-1|AAH17500.1|  595|Homo sapiens POF1B protein protein.        31   7.2  
BC009722-1|AAH09722.2|  208|Homo sapiens similar to common saliv...    31   7.2  
AY359021-1|AAQ89380.1|  178|Homo sapiens HRPE773 protein.              31   7.2  
AL117325-2|CAI42101.1|  595|Homo sapiens premature ovarian failu...    31   7.2  
AL117325-1|CAI42100.1|  589|Homo sapiens premature ovarian failu...    31   7.2  
AK025039-1|BAB15055.1|  306|Homo sapiens protein ( Homo sapiens ...    31   7.2  
AF309774-1|AAM93270.1|  589|Homo sapiens premature ovarian failu...    31   7.2  

>BC026355-1|AAH26355.2|  723|Homo sapiens Bardet-Biedl syndrome 10
           protein.
          Length = 723

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = +3

Query: 573 VMFTKVSGKTGFSYTSTWGKSEEVTESITIGASTGMEAELQPGQAITAVLSAYTGVLEVE 752
           V++   +GK  F +T         T    + + TG+E+ +   Q +T+VL   T +L ++
Sbjct: 643 VLYKSKTGKYSFPHTYIRAVHALQTNQPLVSSQTGLESVMGKYQLLTSVLQCLTKILTID 702

Query: 753 VV 758
           +V
Sbjct: 703 MV 704


>BC013795-1|AAH13795.1|  151|Homo sapiens BBS10 protein protein.
          Length = 151

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = +3

Query: 573 VMFTKVSGKTGFSYTSTWGKSEEVTESITIGASTGMEAELQPGQAITAVLSAYTGVLEVE 752
           V++   +GK  F +T         T    + + TG+E+ +   Q +T+VL   T +L ++
Sbjct: 71  VLYKSKTGKYSFPHTYIRAVHALQTNQPLVSSQTGLESVMGKYQLLTSVLQCLTKILTID 130

Query: 753 VV 758
           +V
Sbjct: 131 MV 132


>AK027213-1|BAB15695.1|  151|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23560 fis, clone LNG09857. ).
          Length = 151

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = +3

Query: 573 VMFTKVSGKTGFSYTSTWGKSEEVTESITIGASTGMEAELQPGQAITAVLSAYTGVLEVE 752
           V++   +GK  F +T         T    + + TG+E+ +   Q +T+VL   T +L ++
Sbjct: 71  VLYKSKTGKYSFPHTYIRAVHALQTNQPLVSSQTGLESVMGKYQLLTSVLQCLTKILTID 130

Query: 753 VV 758
           +V
Sbjct: 131 MV 132


>Z82216-2|CAI43051.1|  595|Homo sapiens premature ovarian failure,
           1B protein.
          Length = 595

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 809 CGP-LEVHHHIPXQRQTVHDLHFQDP 735
           C P  + HHHI  Q Q +H  H+Q P
Sbjct: 182 CHPQAQCHHHIIQQPQVIHSAHWQQP 207


>Z82216-1|CAI43050.1|  589|Homo sapiens premature ovarian failure,
           1B protein.
          Length = 589

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 809 CGP-LEVHHHIPXQRQTVHDLHFQDP 735
           C P  + HHHI  Q Q +H  H+Q P
Sbjct: 182 CHPQAQCHHHIIQQPQVIHSAHWQQP 207


>BC017500-1|AAH17500.1|  595|Homo sapiens POF1B protein protein.
          Length = 595

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 809 CGP-LEVHHHIPXQRQTVHDLHFQDP 735
           C P  + HHHI  Q Q +H  H+Q P
Sbjct: 182 CHPQAQCHHHIIQQPQVIHSAHWQQP 207


>BC009722-1|AAH09722.2|  208|Homo sapiens similar to common salivary
           protein 1 protein.
          Length = 208

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = +3

Query: 531 KAFSITQEIEYDINVMFTKVSGKTGFSYTSTWGKSEEVTESITIGASTGMEAELQPGQAI 710
           K FS T++ +++I  +   V      S     G S +V     +G +T  E  LQPG+ I
Sbjct: 62  KYFSTTEDYDHEITGLRVSVGLLLVKSVQVKLGDSWDVKLG-ALGGNT-QEVTLQPGEYI 119

Query: 711 TAVLSAYTGVLEVEVVY 761
           T V  A+   L   V+Y
Sbjct: 120 TKVFVAFQAFLRGMVMY 136


>AY359021-1|AAQ89380.1|  178|Homo sapiens HRPE773 protein.
          Length = 178

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = +3

Query: 531 KAFSITQEIEYDINVMFTKVSGKTGFSYTSTWGKSEEVTESITIGASTGMEAELQPGQAI 710
           K FS T++ +++I  +   V      S     G S +V     +G +T  E  LQPG+ I
Sbjct: 32  KYFSTTEDYDHEITGLRVSVGLLLVKSVQVKLGDSWDVKLG-ALGGNT-QEVTLQPGEYI 89

Query: 711 TAVLSAYTGVLEVEVVY 761
           T V  A+   L   V+Y
Sbjct: 90  TKVFVAFQAFLRGMVMY 106


>AL117325-2|CAI42101.1|  595|Homo sapiens premature ovarian failure,
           1B protein.
          Length = 595

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 809 CGP-LEVHHHIPXQRQTVHDLHFQDP 735
           C P  + HHHI  Q Q +H  H+Q P
Sbjct: 182 CHPQAQCHHHIIQQPQVIHSAHWQQP 207


>AL117325-1|CAI42100.1|  589|Homo sapiens premature ovarian failure,
           1B protein.
          Length = 589

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 809 CGP-LEVHHHIPXQRQTVHDLHFQDP 735
           C P  + HHHI  Q Q +H  H+Q P
Sbjct: 182 CHPQAQCHHHIIQQPQVIHSAHWQQP 207


>AK025039-1|BAB15055.1|  306|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21386 fis, clone COL03414. ).
          Length = 306

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 809 CGP-LEVHHHIPXQRQTVHDLHFQDP 735
           C P  + HHHI  Q Q +H  H+Q P
Sbjct: 182 CHPQAQCHHHIIQQPQVIHSAHWQQP 207


>AF309774-1|AAM93270.1|  589|Homo sapiens premature ovarian failure
           1B protein protein.
          Length = 589

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -3

Query: 809 CGP-LEVHHHIPXQRQTVHDLHFQDP 735
           C P  + HHHI  Q Q +H  H+Q P
Sbjct: 182 CHPQAQCHHHIIQQPQVIHSAHWQQP 207


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,452,302
Number of Sequences: 237096
Number of extensions: 2448386
Number of successful extensions: 11642
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11630
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)