Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_I17
(973 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70683-1|CAA50018.1| 474|Homo sapiens SOX-4 protein protein. 36 0.30
BC072668-1|AAH72668.1| 474|Homo sapiens SOX4 protein protein. 36 0.30
AL136179-1|CAC03595.1| 474|Homo sapiens SRY (sex determining re... 36 0.30
AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open readi... 26 1.6
AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open readi... 26 1.6
AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5 (od... 25 6.1
AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5 pr... 25 6.1
M94077-1|AAA36181.1| 316|Homo sapiens loricrin protein. 31 6.3
M61120-1|AAA36180.1| 316|Homo sapiens loricrin protein. 31 6.3
CR536555-1|CAG38792.1| 316|Homo sapiens LOR protein. 31 6.3
BC108290-1|AAI08291.1| 316|Homo sapiens LOR protein protein. 31 6.3
BC034690-1|AAH34690.1| 316|Homo sapiens LOR protein protein. 31 6.3
AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein. 31 6.3
AB011094-1|BAA25448.1| 1560|Homo sapiens KIAA0522 protein protein. 25 7.4
AL161779-2|CAI42091.1| 1478|Homo sapiens IQ motif and Sec7 domai... 25 7.4
AL139396-1|CAI39832.1| 1478|Homo sapiens IQ motif and Sec7 domai... 25 7.4
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 31 8.4
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 31 8.4
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 31 8.4
>X70683-1|CAA50018.1| 474|Homo sapiens SOX-4 protein protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.30
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 428 GGGGG*SCXXGXXGGPXPGXXTXXPSRKRSCXPQXGGG 315
GGGGG S G GG G P++K+SC + GG
Sbjct: 169 GGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGG 206
>BC072668-1|AAH72668.1| 474|Homo sapiens SOX4 protein protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.30
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 428 GGGGG*SCXXGXXGGPXPGXXTXXPSRKRSCXPQXGGG 315
GGGGG S G GG G P++K+SC + GG
Sbjct: 169 GGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGG 206
>AL136179-1|CAC03595.1| 474|Homo sapiens SRY (sex determining
region Y)-box 4 protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.30
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 428 GGGGG*SCXXGXXGGPXPGXXTXXPSRKRSCXPQXGGG 315
GGGGG S G GG G P++K+SC + GG
Sbjct: 169 GGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGG 206
>AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open reading
frame 45 protein.
Length = 1137
Score = 26.2 bits (55), Expect(2) = 1.6
Identities = 12/44 (27%), Positives = 13/44 (29%)
Frame = +2
Query: 749 PPPPPPPXXXKKXXXXXXXXXXXXXXXXXKXXXXSPPXXAXPPP 880
PPPPPPP + PP PPP
Sbjct: 922 PPPPPPPPPPPPPPPPPPPPPPPPALDVGETSNLQPPPPLPPPP 965
Score = 25.4 bits (53), Expect(2) = 1.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 746 LPPPPPPP 769
LPPPPPPP
Sbjct: 918 LPPPPPPP 925
>AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open reading
frame 45 protein.
Length = 1137
Score = 26.2 bits (55), Expect(2) = 1.6
Identities = 12/44 (27%), Positives = 13/44 (29%)
Frame = +2
Query: 749 PPPPPPPXXXKKXXXXXXXXXXXXXXXXXKXXXXSPPXXAXPPP 880
PPPPPPP + PP PPP
Sbjct: 922 PPPPPPPPPPPPPPPPPPPPPPPPALDVGETSNLQPPPPLPPPP 965
Score = 25.4 bits (53), Expect(2) = 1.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 746 LPPPPPPP 769
LPPPPPPP
Sbjct: 918 LPPPPPPP 925
>AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5
(odd-paired homolog, Drosophila) protein.
Length = 663
Score = 25.4 bits (53), Expect(2) = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 746 LPPPPPPP 769
LPPPPPPP
Sbjct: 409 LPPPPPPP 416
Score = 24.2 bits (50), Expect(2) = 6.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 749 PPPPPPPXXXKK 784
PPPPPPP K
Sbjct: 418 PPPPPPPAGGAK 429
>AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5
protein protein.
Length = 639
Score = 25.4 bits (53), Expect(2) = 6.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2
Query: 746 LPPPPPPP 769
LPPPPPPP
Sbjct: 385 LPPPPPPP 392
Score = 24.2 bits (50), Expect(2) = 6.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 749 PPPPPPPXXXKK 784
PPPPPPP K
Sbjct: 394 PPPPPPPAGGAK 405
>M94077-1|AAA36181.1| 316|Homo sapiens loricrin protein.
Length = 316
Score = 31.1 bits (67), Expect = 6.3
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 428 GGGGG*SCXXGXXGGPXPGXXTXXPSRKRSCXPQ--XGGG 315
G GGG C G GG G + + SC PQ GGG
Sbjct: 193 GSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGG 232
>M61120-1|AAA36180.1| 316|Homo sapiens loricrin protein.
Length = 316
Score = 31.1 bits (67), Expect = 6.3
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 428 GGGGG*SCXXGXXGGPXPGXXTXXPSRKRSCXPQ--XGGG 315
G GGG C G GG G + + SC PQ GGG
Sbjct: 193 GSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGG 232
>CR536555-1|CAG38792.1| 316|Homo sapiens LOR protein.
Length = 316
Score = 31.1 bits (67), Expect = 6.3
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 428 GGGGG*SCXXGXXGGPXPGXXTXXPSRKRSCXPQ--XGGG 315
G GGG C G GG G + + SC PQ GGG
Sbjct: 193 GSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGG 232
>BC108290-1|AAI08291.1| 316|Homo sapiens LOR protein protein.
Length = 316
Score = 31.1 bits (67), Expect = 6.3
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 428 GGGGG*SCXXGXXGGPXPGXXTXXPSRKRSCXPQ--XGGG 315
G GGG C G GG G + + SC PQ GGG
Sbjct: 193 GSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGG 232
>BC034690-1|AAH34690.1| 316|Homo sapiens LOR protein protein.
Length = 316
Score = 31.1 bits (67), Expect = 6.3
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 428 GGGGG*SCXXGXXGGPXPGXXTXXPSRKRSCXPQ--XGGG 315
G GGG C G GG G + + SC PQ GGG
Sbjct: 193 GSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGG 232
>AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein.
Length = 338
Score = 31.1 bits (67), Expect = 6.3
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -3
Query: 428 GGGGG*SCXXGXXGGPXPGXXTXXPSRKRSCXPQ--XGGG 315
G GGG C G GG G + + SC PQ GGG
Sbjct: 193 GSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGG 232
>AB011094-1|BAA25448.1| 1560|Homo sapiens KIAA0522 protein protein.
Length = 1560
Score = 24.6 bits (51), Expect(2) = 7.4
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 746 LPPPPPPP 769
+PPPPPPP
Sbjct: 1247 MPPPPPPP 1254
Score = 24.6 bits (51), Expect(2) = 7.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 749 PPPPPPPXXXK 781
PPPPPPP K
Sbjct: 1250 PPPPPPPEEYK 1260
>AL161779-2|CAI42091.1| 1478|Homo sapiens IQ motif and Sec7 domain 2
protein.
Length = 1478
Score = 24.6 bits (51), Expect(2) = 7.4
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 746 LPPPPPPP 769
+PPPPPPP
Sbjct: 1170 MPPPPPPP 1177
Score = 24.6 bits (51), Expect(2) = 7.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 749 PPPPPPPXXXK 781
PPPPPPP K
Sbjct: 1173 PPPPPPPEEYK 1183
>AL139396-1|CAI39832.1| 1478|Homo sapiens IQ motif and Sec7 domain 2
protein.
Length = 1478
Score = 24.6 bits (51), Expect(2) = 7.4
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 746 LPPPPPPP 769
+PPPPPPP
Sbjct: 1170 MPPPPPPP 1177
Score = 24.6 bits (51), Expect(2) = 7.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 749 PPPPPPPXXXK 781
PPPPPPP K
Sbjct: 1173 PPPPPPPEEYK 1183
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 30.7 bits (66), Expect = 8.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 973 GGXXGPPPPPPXXGGXXPXXXXXXXRXXKXKGGGXGXXGG 854
GG PPPPPP G GGG G GG
Sbjct: 346 GGAAPPPPPPPGALGSFALAAAANGYLGAGAGGGAGGGGG 385
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 30.7 bits (66), Expect = 8.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 973 GGXXGPPPPPPXXGGXXPXXXXXXXRXXKXKGGGXGXXGG 854
GG PPPPPP G GGG G GG
Sbjct: 340 GGAAPPPPPPPGALGSFALAAAANGYLGAGAGGGAGGGGG 379
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 30.7 bits (66), Expect = 8.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 973 GGXXGPPPPPPXXGGXXPXXXXXXXRXXKXKGGGXGXXGG 854
GG PPPPPP G GGG G GG
Sbjct: 312 GGAAPPPPPPPGALGSFALAAAANGYLGAGAGGGAGGGGG 351
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,775,905
Number of Sequences: 237096
Number of extensions: 1443284
Number of successful extensions: 30838
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21244
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12936258326
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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