Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_I14
(871 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0200 + 2400929-2402161 54 1e-07
09_06_0142 - 21107878-21109104 51 1e-06
02_03_0240 - 16739628-16740369,16740392-16740978 38 0.008
01_05_0175 - 18936752-18937621,18938855-18941641 31 1.6
04_03_0565 + 17207582-17207811,17208026-17208320 30 2.8
09_02_0543 + 10427321-10428315,10428440-10429154 29 3.7
02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608 29 3.7
08_02_0880 + 22203440-22204324,22204763-22204876,22204964-222054... 29 4.8
01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398... 29 4.8
06_03_1105 - 27634787-27636025 29 6.4
06_01_0170 - 1352865-1353422,1355049-1355327 29 6.4
05_07_0100 + 27679280-27680320 29 6.4
04_03_1022 - 21778315-21779007 28 8.5
01_06_1740 - 39575614-39576981 28 8.5
>04_01_0200 + 2400929-2402161
Length = 410
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +1
Query: 619 VIREIVESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 762
+I +IV S F+V+DL +VV Y W+ LP V PFYAVKCN D
Sbjct: 38 LIHDIVASSSARSAFHVLDLAKVVDLYAGWRRALPGVRPFYAVKCNPD 85
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 795 GTGFDCASXAEIXLVTSLGXHP 860
G GFDCAS AEI V +LG P
Sbjct: 96 GAGFDCASRAEIEAVLALGVPP 117
>09_06_0142 - 21107878-21109104
Length = 408
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +1
Query: 562 KVVEEQRIRVMEGSWSPVSVIREIVESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFY 741
KV+ +R + + ++IR+IV G + F+V DL +VV ++ W+ LP V P Y
Sbjct: 14 KVLAFKRGKGKDADAGVTALIRDIVAGGARS-AFHVFDLAKVVDLHRGWRRALPDVRPCY 72
Query: 742 AVKCNDD 762
AVKCN D
Sbjct: 73 AVKCNPD 79
Score = 32.7 bits (71), Expect = 0.39
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 795 GTGFDCASXAEIXLVTSLGXHP 860
G GFDCAS AEI V +LG P
Sbjct: 90 GAGFDCASRAEIEAVLALGVRP 111
>02_03_0240 - 16739628-16740369,16740392-16740978
Length = 442
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 661 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCN 756
F V+DLGEV + W L V P+YAVKCN
Sbjct: 63 FNVIDLGEVARLFAAWWRGLRGVRPYYAVKCN 94
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 795 GTGFDCASXAEIXLVTSLG 851
G GFDCAS AE+ V +LG
Sbjct: 107 GAGFDCASRAEMEAVLALG 125
>01_05_0175 - 18936752-18937621,18938855-18941641
Length = 1218
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 247 VWQCRAERTHSPP-XXXXXXXXTSPQRRPALAAPCQGPLTPPH 372
VW+CR + + +PP T+P A AAP + PPH
Sbjct: 57 VWRCRVKTSWTPPDSYPDFALPTAPASASAAAAPPRYDRVPPH 99
>04_03_0565 + 17207582-17207811,17208026-17208320
Length = 174
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 635 WRAGCRRTPST*WTSARLSPATSSGRSSCPGLSR 736
WR CRR W + GRSSC +SR
Sbjct: 103 WRRQCRRPVQLHWWGVTWRDGVAGGRSSCATVSR 136
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 348 PGPADATSPHSPDTCGLALVGPQDQAP 428
PGPA A SPHSP V P P
Sbjct: 70 PGPAAAPSPHSPSPSNAPWVAPAADIP 96
>02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608
Length = 375
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = -1
Query: 460 QLSGLAVSSVVGAWSWGPTSASPQVSGECGEVASAGPGTAQPGRVYV 320
+ +G A + AW+WGP G C A P A +Y+
Sbjct: 185 RFAGSAEAFDPAAWAWGPVQERVLDEGTCPRTCCAAPAPAAGATMYM 231
>08_02_0880 +
22203440-22204324,22204763-22204876,22204964-22205455,
22205646-22205819,22206589-22206978,22209927-22210022,
22210645-22210760,22210872-22211042,22211126-22211285,
22211388-22211573,22211665-22211793,22211918-22211996,
22212159-22212268
Length = 1033
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 590 TLMRCSSTTFMVLSNFTWTCFLSLSRARRGPAPRSTVP 477
+L RCSST+ + F W S + A R P P P
Sbjct: 118 SLSRCSSTSSRIRKKFAWLRSPSPAPAPRAPTPSEPPP 155
>01_01_0543 +
3985771-3985866,3985965-3986145,3986668-3986780,
3986854-3987190,3987602-3987603,3987661-3987743,
3988017-3988116,3988330-3988463,3988711-3988788,
3989333-3989387,3990159-3990239,3990369-3990567,
3990609-3990699,3990770-3990892,3991440-3991528,
3992450-3992539,3992619-3992792,3992911-3993035,
3993246-3993372,3993826-3993998
Length = 816
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 738 KRLNPGQELLPLLVAGDNLAEVHH 667
K + PG+ELLP +GDN AE H
Sbjct: 605 KGIQPGEELLPEGASGDNKAEPVH 628
>06_03_1105 - 27634787-27636025
Length = 412
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 206 RITPLKGAPGESGACGSAGRNGRT-ARPRPSPRCWRRALNVDPP 334
RI ++ + S + S+ R GR+ AR RPSP R L+VD P
Sbjct: 267 RIRLVRSSHRHSTSSSSSSRAGRSPARRRPSPPPPPRCLSVDSP 310
>06_01_0170 - 1352865-1353422,1355049-1355327
Length = 278
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 242 GACGSAGRNGRTARPRPSPR 301
G GSAGR+GR PR +PR
Sbjct: 208 GVDGSAGRSGRRGPPRAAPR 227
>05_07_0100 + 27679280-27680320
Length = 346
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 490 RGAGPRRARDKLRKQVHVKLDNTMKVVEEQRIRVMEGSWS 609
RGA RR + Q ++D K + +R RVM +WS
Sbjct: 81 RGAAARRRPPRTDVQCKNRVDTLKKKYKAERARVMPSTWS 120
>04_03_1022 - 21778315-21779007
Length = 230
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 316 PQRRPALAAPCQGPLTPPHHIH 381
P PA AP GP PPHH H
Sbjct: 71 PPHTPA-PAPAPGPYIPPHHPH 91
>01_06_1740 - 39575614-39576981
Length = 455
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 796 PQSRPGWSTATXHHCTSQRKTAQPWAGAPS 707
PQ PG++TA H TS A P +PS
Sbjct: 194 PQDEPGFATAARHPRTSPGTPALPGRSSPS 223
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,516,620
Number of Sequences: 37544
Number of extensions: 512624
Number of successful extensions: 1843
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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