Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_I14
(871 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094710-1|AAM11063.1| 394|Drosophila melanogaster GH13851p pro... 49 7e-06
AE013599-568|AAF59150.1| 394|Drosophila melanogaster CG8721-PA ... 49 7e-06
X66601-1|CAA47167.1| 394|Drosophila melanogaster ornithine deca... 48 1e-05
X66599-1|CAA47165.1| 394|Drosophila melanogaster ornithine dec... 48 1e-05
X66600-1|CAA47166.1| 393|Drosophila melanogaster ornithine dec... 46 9e-05
AE013599-569|AAF59149.2| 393|Drosophila melanogaster CG8719-PA ... 46 9e-05
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 31 2.1
AY128482-1|AAM75075.1| 726|Drosophila melanogaster RE61267p pro... 30 4.8
AE014298-2073|AAF48400.1| 726|Drosophila melanogaster CG9514-PA... 30 4.8
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 29 8.3
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 29 8.3
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 29 8.3
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 29 8.3
BT023567-1|AAY84967.1| 296|Drosophila melanogaster IP09595p pro... 29 8.3
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 29 8.3
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 29 8.3
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 29 8.3
AE013599-2780|AAF57629.1| 296|Drosophila melanogaster CG15082-P... 29 8.3
>AY094710-1|AAM11063.1| 394|Drosophila melanogaster GH13851p
protein.
Length = 394
Score = 49.2 bits (112), Expect = 7e-06
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +1
Query: 613 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 762
+++ R I E +Q + + DL V + + W++LLPR++PFYAVKCNDD
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDD 66
>AE013599-568|AAF59150.1| 394|Drosophila melanogaster CG8721-PA
protein.
Length = 394
Score = 49.2 bits (112), Expect = 7e-06
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Frame = +1
Query: 613 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 762
+++ R I E +Q + + DL V + + W++LLPR++PFYAVKCNDD
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDD 66
>X66601-1|CAA47167.1| 394|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 394
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 613 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 762
+++ R I E +Q + + DL V + W++LLPR++PFYAVKCNDD
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERNVRLWQKLLPRIKPFYAVKCNDD 66
>X66599-1|CAA47165.1| 394|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 394
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 613 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 762
+++ R I E +Q + + DL V + W++LLPR++PFYAVKCNDD
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERNVRLWQKLLPRIKPFYAVKCNDD 66
>X66600-1|CAA47166.1| 393|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 393
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +1
Query: 622 IREIVESGVQE---DPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 762
IR+++E E + DL + + + W +L+PR+EP YAVKCNDD
Sbjct: 17 IRKVIEQADLEHLDQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCNDD 66
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 795 GTGFDCASXAEIXLVTSLGXHP 860
GTGFDCAS E+ LV G P
Sbjct: 77 GTGFDCASKNELKLVLGFGVSP 98
>AE013599-569|AAF59149.2| 393|Drosophila melanogaster CG8719-PA
protein.
Length = 393
Score = 45.6 bits (103), Expect = 9e-05
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +1
Query: 622 IREIVESGVQE---DPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCNDD 762
IR+++E E + DL + + + W +L+PR+EP YAVKCNDD
Sbjct: 17 IRKVIEQADLEHLDQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCNDD 66
Score = 32.7 bits (71), Expect = 0.68
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 795 GTGFDCASXAEIXLVTSLGXHP 860
GTGFDCAS E+ LV LG P
Sbjct: 77 GTGFDCASKNELKLVLGLGVSP 98
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 689 TTSPRSIT*KGSSCTPLSTISRITLTGDHD-PSITLMRCSSTT 564
TT+PR T S+C P +T R T T P+ T RC++TT
Sbjct: 269 TTTPRCTT-TTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTT 310
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 689 TTSPRSIT*KGSSCTPLSTISRITLTGDHDPSITLMRCSSTT 564
TT+PRS T +SC +T T T P+ T R ++TT
Sbjct: 909 TTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPRSTTTT 950
Score = 29.9 bits (64), Expect = 4.8
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -3
Query: 689 TTSPRSIT*KGSSCTPLSTISR-ITLTGDHDPSITLMRCSSTTFMVLSNFTWTCFLSLSR 513
TT+PR T S+C+P T R T T P+ T RC TT S T T S ++
Sbjct: 301 TTTPRCTT-TTSTCSPTRTTPRSTTTTSTSRPTTTTPRC--TTTPSTSRPTTTTPRSTTK 357
Query: 512 ARRGPAPRSTVPFP 471
AP +T P P
Sbjct: 358 TST-CAPTTTTPRP 370
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 689 TTSPRSIT*KGSSCTPLSTISRITLTGDHDPSITLMRCSSTT 564
TT+PRS T +S +T T T P+ T RC++TT
Sbjct: 237 TTTPRSTTTTTTSRPTTTTPRSTTTTTTRRPTTTTPRCTTTT 278
>AY128482-1|AAM75075.1| 726|Drosophila melanogaster RE61267p
protein.
Length = 726
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 188 EIIKALRITPLKGAPGESGACGSAGRNGRTARPRPSPRC-WR--RALN 322
++IK L +TP G G G + R G P P PR WR R+LN
Sbjct: 651 DMIKQLWLTPTTAPVGVQGQ-GPSPRQGHNTSPAPPPRTQWRSKRSLN 697
>AE014298-2073|AAF48400.1| 726|Drosophila melanogaster CG9514-PA
protein.
Length = 726
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 188 EIIKALRITPLKGAPGESGACGSAGRNGRTARPRPSPRC-WR--RALN 322
++IK L +TP G G G + R G P P PR WR R+LN
Sbjct: 651 DMIKQLWLTPTTAPVGVQGQ-GPSPRQGHNTSPAPPPRTQWRSKRSLN 697
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 224 GAPGESGACGSAGRNGRTARP 286
GAPGE G G GR+GR P
Sbjct: 1428 GAPGERGFTGPKGRDGRDGTP 1448
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 224 GAPGESGACGSAGRNGRTARP 286
GAPGE G G GR+GR P
Sbjct: 74 GAPGERGFTGPKGRDGRDGTP 94
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 224 GAPGESGACGSAGRNGRTARP 286
GAPGE G G GR+GR P
Sbjct: 1428 GAPGERGFTGPKGRDGRDGTP 1448
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 224 GAPGESGACGSAGRNGRTARP 286
GAPGE G G GR+GR P
Sbjct: 1428 GAPGERGFTGPKGRDGRDGTP 1448
>BT023567-1|AAY84967.1| 296|Drosophila melanogaster IP09595p
protein.
Length = 296
Score = 29.1 bits (62), Expect = 8.3
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 149 LQHLATACRVVA*EIIKALRITPLKGAPGESGACGSAGRNGRTARPRPSPRCWRRALNVD 328
+ HL R++ ++ L PL+ AP GA + + TAR R P W R +D
Sbjct: 1 MSHLVMRRRIL---LMVLLFAGPLRNAPF-GGAQVAIATSPTTARDRQIPPEWDRNWKLD 56
Query: 329 PPW 337
P W
Sbjct: 57 PDW 59
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 224 GAPGESGACGSAGRNGRTARP 286
GAPGE G G GR+GR P
Sbjct: 1429 GAPGERGFTGPKGRDGRDGTP 1449
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 224 GAPGESGACGSAGRNGRTARP 286
GAPGE G G GR+GR P
Sbjct: 1429 GAPGERGFTGPKGRDGRDGTP 1449
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 224 GAPGESGACGSAGRNGRTARP 286
GAPGE G G GR+GR P
Sbjct: 1429 GAPGERGFTGPKGRDGRDGTP 1449
>AE013599-2780|AAF57629.1| 296|Drosophila melanogaster CG15082-PA
protein.
Length = 296
Score = 29.1 bits (62), Expect = 8.3
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 149 LQHLATACRVVA*EIIKALRITPLKGAPGESGACGSAGRNGRTARPRPSPRCWRRALNVD 328
+ HL R++ ++ L PL+ AP GA + + TAR R P W R +D
Sbjct: 1 MSHLVMRRRIL---LMVLLFAGPLRNAPF-GGAQVAIATSPTTARDRQIPPEWDRNWKLD 56
Query: 329 PPW 337
P W
Sbjct: 57 PDW 59
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,692,228
Number of Sequences: 53049
Number of extensions: 818722
Number of successful extensions: 2351
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2335
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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