Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_I07
         (846 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    25   0.66 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   6.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   8.2  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              22   8.2  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +3

Query: 303 YNREIFNDDRGKLTGQAYGTRVLGPGGDSTNYGG---RLDWANKNAQATIDLNRQIGGR 470
           Y + ++  D+  +TG AYG   + PG  S  + G     ++ N   +   ++ R  GGR
Sbjct: 60  YKQRVY--DKNGMTGDAYGGLNIRPGQPSRQHAGFEFGKEYKNGFIKGQSEVQRGPGGR 116


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 93  IQILFYIFATTLVCVNAEVYG 155
           IQ   ++FA T  C+N  VYG
Sbjct: 297 IQKGLFLFACTNSCMNPIVYG 317


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
            ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 29   REFLKILTFGLEERNLIQLKMNTNLVL-YLRYNSGV 133
            R+ L+   FG E+R L+ +K    L+  YL    GV
Sbjct: 944  RKILEPFGFGFEQRGLVFVKGKGQLLTHYLVSKDGV 979


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 137 NTHQSCSEDIKQDLYSF*VVS 75
           N+   C  DI++DLY+  V+S
Sbjct: 55  NSIMKCDVDIRKDLYANTVLS 75


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,772
Number of Sequences: 438
Number of extensions: 5059
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)