Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_I01
         (1177 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    33   0.004
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.9  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 33.5 bits (73), Expect = 0.004
 Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
 Frame = +3

Query: 720 RTPXSXAPPQWTLPXAXPRPXPTMATLXRTPXPSXNQXXPTRXPPP-PPXPXXXRXP--X 890
           R   S A P    P   P+P P    L R P        P   P P PP P   R P   
Sbjct: 90  REAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAE 149

Query: 891 PGQXRRXTPIXPXP 932
           PG  R      P P
Sbjct: 150 PGNNRPVYIPQPRP 163


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +3

Query: 732 SXAPPQWTLPXAXPRPXPTMATLXRTPXPSXNQXXPTRXPPPPPXP 869
           S  PP + +    P     + +  R+P  +  Q  P+   P PP P
Sbjct: 378 SQPPPNFGVSQVSPVSMSALVSAVRSP--AGGQLPPSAGAPMPPIP 421



 Score = 22.6 bits (46), Expect = 6.9
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 745 PSGXSXXPXPGLXPXWPPSXAP 810
           P   S  P PG  P  PPS  P
Sbjct: 39  PPNPSQGPPPGGPPGAPPSQNP 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.135    0.450 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,450
Number of Sequences: 438
Number of extensions: 4759
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40006332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)