Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_H22
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical pr...    93   2e-19

>U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical
           protein C24B5.4 protein.
          Length = 284

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 45/125 (36%), Positives = 72/125 (57%)
 Frame = +2

Query: 194 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIY 373
           V    L +NF+ VEV++ D PDL++PP+  KS G   + ++ E+GGP  L P    D  +
Sbjct: 1   VFQTSLLSNFENVEVNIVDCPDLSKPPFNQKSSGFGHNLRIAEVGGPGNLYPGFHIDHQF 60

Query: 374 DLAKLLEHLNRDPAFLAGAGAGPWPYLGVNCEGIVNLSVRNGTVDQGTRIVSVHPVRSAQ 553
           D+ K+ +      A + G GAGPWP +G NCE + +++++ G V  GTRI  ++     +
Sbjct: 61  DIPKIGKVCEHPEAAVFGPGAGPWPIVGQNCEMVADVNLKTGEV--GTRIAEINSNSDKR 118

Query: 554 GQQRL 568
             QR+
Sbjct: 119 YVQRI 123



 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +3

Query: 591 DETRTALLGNYLLTEG-KPGKVIKVVAKNRTGKSNFITSIRETLKTHYGDKVVGLGGAFV 767
           DE + +L+ N  L++  K   V+   A  R G+ N    IR+ L+ H+G K+V L G F+
Sbjct: 125 DEPKFSLMANLALSDADKSSTVVHFKASVRKGEKNLTNCIRDGLQEHFGKKIVSLAGQFI 184

Query: 768 LRAGR 782
           ++ G+
Sbjct: 185 IQTGK 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,106,978
Number of Sequences: 27780
Number of extensions: 415365
Number of successful extensions: 1172
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)