Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_H16
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0736 - 31585840-31586459,31586545-31587070,31588051-315881... 33 0.23
03_05_0382 + 23649597-23649645,23649675-23649735,23650784-236509... 33 0.31
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 32 0.71
01_06_0159 + 27089006-27089064,27089925-27090007,27090414-270905... 31 1.2
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 31 1.6
02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 31 1.6
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 30 2.2
11_01_0658 + 5342508-5343602,5343697-5343764,5343994-5344042,534... 30 2.9
09_04_0549 + 18478475-18478664,18479381-18480648 29 3.8
09_04_0547 + 18467016-18467205,18467922-18469189 29 3.8
11_01_0260 - 1985258-1985794,1986874-1986990 29 5.0
09_05_0016 + 20089545-20089748,20090072-20090263,20090644-200908... 29 5.0
07_03_0072 - 13051145-13052362 29 5.0
04_03_0162 + 12117799-12117872,12118714-12118747,12118839-121189... 29 6.7
01_06_1573 - 38329476-38329591,38330535-38330871 29 6.7
09_06_0019 + 20258844-20258988,20259870-20259974,20261027-202610... 28 8.8
04_04_1351 - 32827136-32827984 28 8.8
01_07_0037 + 40657449-40658010,40658567-40658901 28 8.8
>01_06_0736 -
31585840-31586459,31586545-31587070,31588051-31588149,
31589344-31589427,31589458-31589775,31589907-31590113
Length = 617
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 435 YDTNYNMFVPGTIFRIVFEIKDTDVITIYCQGEVPFELPPE---DTTQHGQ 578
YD NY M++PG ++ ++ T + Y Q +P ELPP DT+ GQ
Sbjct: 251 YDDNYKMYLPGYNSDVLNNLESTGQLE-YPQFNLPQELPPNAYLDTSNCGQ 300
>03_05_0382 +
23649597-23649645,23649675-23649735,23650784-23650937,
23651019-23651149,23651239-23651315,23651439-23651477,
23651976-23652067,23652140-23652277,23652385-23652549
Length = 301
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 420 IGSGNYDTNYNMFVPGTIFRIVFEIKDT 503
IGS NYDT+Y + VP RI+F++ T
Sbjct: 237 IGSSNYDTSYKIRVPSWTDRILFKVDHT 264
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 31.9 bits (69), Expect = 0.71
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 646 VSGDEAGAPG--AFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNRS 777
VSG APG A AP+ PP V+ PRA TA P+ S
Sbjct: 79 VSGGGGSAPGGAATAPRQGAPPAAATSVQGAPRAPATAATVPQGGS 124
>01_06_0159 +
27089006-27089064,27089925-27090007,27090414-27090588,
27091442-27091592,27091629-27091752,27092378-27092446,
27093197-27093291
Length = 251
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 461 SWHDISDSLRNQGHGR-HHDILPGGSSIRTSSRRY 562
SW +S +L GHGR HH + I+ SSRR+
Sbjct: 5 SWPTVSKNLPLLGHGRSHHPMYASQDEIKMSSRRW 39
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 185 GRLRGY*--T*NAGFHRQHTGITKSWRQNRDRWQNQGECKKDVREPLRSRRRGAEGCGSP 358
GR RGY + + + ++SW ++R R ++ + R P RSR R + P
Sbjct: 1223 GRSRGYDRRSGSRSLSSRSRSRSRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGP 1282
Query: 359 LRREIP 376
RR P
Sbjct: 1283 ARRPRP 1288
>02_04_0347 +
22193708-22193720,22194317-22194390,22195388-22196132,
22196203-22196417,22196505-22196786,22196870-22196998,
22197088-22197267,22197538-22197645,22197888-22198094
Length = 650
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 222 FTANIPGLLKVGDKIEIGGKIKENARKMSVNLCAQE--GEEPRDVVLHFDVRFHRDNI 389
FT +IP L VG + I G + ++L E G + +VLH+DVR D +
Sbjct: 187 FTIDIPCGLIVGSSVTIIGTPGSLSGNFRIDLVGTELPGGSGKPIVLHYDVRLTSDEL 244
>07_01_0389 -
2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 685 PQSPRPPLVVGDVKRCPRAKKTATGSPKNRSSNESSDE 798
PQ P PP R PRA +TAT P + SS+ + D+
Sbjct: 10 PQPPPPPSPPNPPPRAPRATRTAT--PDDASSSSAVDD 45
>11_01_0658 +
5342508-5343602,5343697-5343764,5343994-5344042,
5344217-5344333,5344438-5344506,5344631-5344725,
5345580-5345658,5346499-5346563,5347368-5347461,
5347675-5347744,5348363-5349357
Length = 931
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 374 PPGQHHIAVQEERHLDRKRKLRHQLQH 454
PP QH Q+++HLD + L+HQ QH
Sbjct: 145 PPPQHQ---QQQQHLDAMQDLQHQHQH 168
>09_04_0549 + 18478475-18478664,18479381-18480648
Length = 485
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +3
Query: 390 ISLSRKNGIWIGSGNYDTNYNMFVPGTIFRIVFEIKDTDVITIYCQ 527
+SL + GI +G+GNY + + P + ++F+ +D+ + C+
Sbjct: 134 VSLPAQRGISLGTGNYVVSVGLGTPAKQYAVIFD-TGSDLSWVQCK 178
>09_04_0547 + 18467016-18467205,18467922-18469189
Length = 485
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +3
Query: 390 ISLSRKNGIWIGSGNYDTNYNMFVPGTIFRIVFEIKDTDVITIYCQ 527
+SL + GI +G+GNY + + P + ++F+ +D+ + C+
Sbjct: 134 VSLPAQRGISLGTGNYVVSVGLGTPAKQYAVIFD-TGSDLSWVQCK 178
>11_01_0260 - 1985258-1985794,1986874-1986990
Length = 217
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 239 GITKSWRQNRDRWQNQGECKKDVREPLRSRRRGAEGCG 352
G+ K RQN++R + +G C+ ++ P+ + CG
Sbjct: 153 GLWKVGRQNKERGRGRGRCRGSLQPPVHVVGQQQSSCG 190
>09_05_0016 +
20089545-20089748,20090072-20090263,20090644-20090814,
20090915-20091096,20091189-20091435,20091776-20091908,
20092070-20092599,20092940-20093170
Length = 629
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 673 GAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNRSSNESSDEEL 804
G P+ PRP V +K R+KK +G S +SSD +L
Sbjct: 571 GFETPKGPRPSGVQLSIKEFYRSKKGLSGDSGKDGSRKSSDVDL 614
>07_03_0072 - 13051145-13052362
Length = 405
Score = 29.1 bits (62), Expect = 5.0
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Frame = +2
Query: 251 SWRQNRDRWQNQGECKKDVREPLRSRRRGAE-GCGSPLRREIPPGQHHIAVQEERHLDRK 427
+W+ R W++Q ++ +R PL RR P + G H + R L++
Sbjct: 218 AWQCRRGYWRSQRRQRRRLRVPLPWRRSTVRASVRFPGDAIMRIGFHSGRRKFRRRLEQS 277
Query: 428 RKLRHQLQHVCSWHDI--SDSLRNQGHGRHHDILP---GGSSIRTSSRRY 562
R WHD+ + +LR G R D LP G + R+ S R+
Sbjct: 278 HGKRSGFFGRQVWHDLLANRALRADGPARALDWLPRRRGDGADRSESERW 327
>04_03_0162 +
12117799-12117872,12118714-12118747,12118839-12118920,
12119266-12119453
Length = 125
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +2
Query: 320 RSRRRGAEGCGSPLRREIPPGQHHIAVQEERHLDRKRKLRHQLQHVCSWHDISDSLRNQG 499
R RRR G ++P +H I++ + + +R L + + H +D+ +
Sbjct: 20 RGRRRRVNGRYRVNAEDLPRIEHRISIDDTTITNVQRDLCYFIHHALVLSSQADAFSSSP 79
Query: 500 HGRHHDILPGGSSIRTSSRR 559
G+ I PGG R RR
Sbjct: 80 PGK--IIFPGGPPDRVDLRR 97
>01_06_1573 - 38329476-38329591,38330535-38330871
Length = 150
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 428 RKLRHQLQHVCSWHDISDSLRNQGHGRHHDILPGGSSIRTSSR 556
R +H L+ H L +Q HGR ++ GGS R+ SR
Sbjct: 63 RARQHGLEVWMRCHAQKPKLASQAHGREAELAGGGSISRSGSR 105
>09_06_0019 +
20258844-20258988,20259870-20259974,20261027-20261097,
20261658-20261714,20262661-20262849,20263096-20263119
Length = 196
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 236 TGITKSWRQNRDRWQNQGECKKDVREPLRSRRRGA--EGCGSPLRREIPPGQHHIAVQEE 409
TG++K+ QN+ W+ + +K V L + G + G P RR PG A ++
Sbjct: 100 TGLSKALYQNKTVWKAI-DYEKLVNSWLYNELPGCTDDVAGRPSRRFRCPGDFAFATDQK 158
Query: 410 RHLDRK 427
+HL R+
Sbjct: 159 QHLPRE 164
>04_04_1351 - 32827136-32827984
Length = 282
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 646 VSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNRSSNESSDEELKVRV 816
+ G G G ++P SP PP G K CP + +P SS+ + LK+ V
Sbjct: 159 IGGGSGG--GGYSP-SPSPPKRHGGRKACPPSPTPTPSTPTPSSSDTCPIDALKLGV 212
>01_07_0037 + 40657449-40658010,40658567-40658901
Length = 298
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 655 DEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNRSS 780
D A G A + P PPL+V + AK+ S KN +S
Sbjct: 164 DLADGDGVDADELPPPPLMVMPISATVSAKRGGAASDKNSTS 205
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,717,596
Number of Sequences: 37544
Number of extensions: 600095
Number of successful extensions: 2046
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2045
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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