Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_H07
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0638 - 19503580-19503990                                         29   3.8  
08_02_1084 - 24232968-24234779                                         29   5.0  
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379...    28   8.8  

>10_08_0638 - 19503580-19503990
          Length = 136

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 802 PRXPPXXKPPPGPPXXXPT 858
           P  PP  KPPP PP   PT
Sbjct: 115 PPPPPRKKPPPQPPPSRPT 133


>08_02_1084 - 24232968-24234779
          Length = 603

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 858 GGXXXGGPGGGFXXGGXPW 802
           GG   GGPGGG   GG  W
Sbjct: 306 GGGRGGGPGGGAGGGGGNW 324


>05_04_0206 +
           19034259-19035462,19036870-19037045,19037752-19037975,
           19038133-19038914,19039337-19039494
          Length = 847

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 802 PRXPPXXKPPPGPPXXXPTXXXKKKK 879
           PR P    PPP  P   P    KKKK
Sbjct: 294 PRTPEMVTPPPSLPPRPPAVSSKKKK 319


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.316    0.147    0.478 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,462,108
Number of Sequences: 37544
Number of extensions: 123530
Number of successful extensions: 919
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)