Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_H06
         (925 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.97 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   3.0  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    23   3.0  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 25.0 bits (52), Expect = 0.97
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 348 RSTGLXIXVRVGGAPLPVXAGIGGV 422
           RSTGL + +RVG     V AGI G+
Sbjct: 509 RSTGLHLQIRVGVHSGAVVAGIVGL 533


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 425 QNAANSCXYGERCTSDXY 372
           +NA   C YG  C  D Y
Sbjct: 217 KNAVYQCKYGNNCEIDMY 234


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 425 QNAANSCXYGERCTSDXY 372
           +NA   C YG  C  D Y
Sbjct: 14  KNAVYQCKYGNNCEIDMY 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,641
Number of Sequences: 438
Number of extensions: 1743
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)