Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_H01
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047...    29   3.7  
04_04_1029 + 30243218-30244163,30246090-30246254,30246775-30247985     29   4.8  
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907...    29   6.4  

>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
            27505576-27507522,27508478-27508946,27509898-27510079,
            27510746-27511208,27511295-27511691,27511810-27511937,
            27512106-27512273,27512452-27512559,27512830-27512838
          Length = 1382

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
 Frame = +1

Query: 673  NGNGYE-----PIDNGAYYVDPSPRPTLLQAYPFP 762
            +GN Y      P  N AY++ P P P     YP+P
Sbjct: 1189 HGNNYHQPPSVPPPNNAYHLQPPPHPPFPNQYPYP 1223


>04_04_1029 + 30243218-30244163,30246090-30246254,30246775-30247985
          Length = 773

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 715 VDPSPRPTLLQAYPFPWCSRXEV 783
           VDP+P PT LQA PF +  R ++
Sbjct: 126 VDPAPAPTSLQATPFTFSRRNKL 148


>01_01_1145 +
           9073973-9074281,9075440-9075998,9076088-9076241,
           9077475-9077565,9077722-9077793,9077879-9078390,
           9078854-9078923,9079514-9079579,9080266-9080570,
           9080872-9081006,9081141-9081204,9081429-9081574,
           9081669-9081773,9082310-9082490
          Length = 922

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
 Frame = +1

Query: 607 GNGYEPIDNRPYIVNPPKDYNPNGNG---------YEPIDNGAYYVDPSPRPTLLQAYPF 759
           G+G    +N+ Y  N PK  +P  NG         Y       +Y    P P +L  YP+
Sbjct: 113 GHGNPNKNNQAYHRNGPKRRSPAANGTPSYPAAMPYHQHPGQPFYYPVIPSPVILHEYPY 172

Query: 760 P 762
           P
Sbjct: 173 P 173


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,810,440
Number of Sequences: 37544
Number of extensions: 321544
Number of successful extensions: 680
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)