Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_H01
(871 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 31 5.4
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 31 5.4
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 31 5.4
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 31 5.4
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 31 5.4
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 31 5.4
DQ174517-1|ABA08383.1| 102|Homo sapiens Slu7 protein. 31 7.2
DQ174516-1|ABA08382.1| 101|Homo sapiens Slu7 protein. 31 7.2
BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor ho... 31 7.2
AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor... 31 7.2
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 562 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDP 723
A A PV + A NGY P+ +P P PNG P + A VDP
Sbjct: 157 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDP 210
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 562 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDP 723
A A PV + A NGY P+ +P P PNG P + A VDP
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDP 317
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 562 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDP 723
A A PV + A NGY P+ +P P PNG P + A VDP
Sbjct: 206 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDP 259
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 562 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDP 723
A A PV + A NGY P+ +P P PNG P + A VDP
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDP 317
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 562 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDP 723
A A PV + A NGY P+ +P P PNG P + A VDP
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDP 317
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 562 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDP 723
A A PV + A NGY P+ +P P PNG P + A VDP
Sbjct: 240 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDP 293
>DQ174517-1|ABA08383.1| 102|Homo sapiens Slu7 protein.
Length = 102
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 658 KDYNPNGNGYEPIDNGAYYVDPSPRPTLLQAYPFP 762
KD NP+ Y I + +Y+DPS RPTL P P
Sbjct: 57 KDINPHIPQY--ISSVPWYIDPSKRPTLKHQRPQP 89
>DQ174516-1|ABA08382.1| 101|Homo sapiens Slu7 protein.
Length = 101
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 658 KDYNPNGNGYEPIDNGAYYVDPSPRPTLLQAYPFP 762
KD NP+ Y I + +Y+DPS RPTL P P
Sbjct: 57 KDINPHIPQY--ISSVPWYIDPSKRPTLKHQRPQP 89
>BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor
homolog (S. cerevisiae) protein.
Length = 586
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 658 KDYNPNGNGYEPIDNGAYYVDPSPRPTLLQAYPFP 762
KD NP+ Y I + +Y+DPS RPTL P P
Sbjct: 57 KDINPHIPQY--ISSVPWYIDPSKRPTLKHQRPQP 89
>AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor
SLU7 protein.
Length = 586
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 658 KDYNPNGNGYEPIDNGAYYVDPSPRPTLLQAYPFP 762
KD NP+ Y I + +Y+DPS RPTL P P
Sbjct: 57 KDINPHIPQY--ISSVPWYIDPSKRPTLKHQRPQP 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,735,158
Number of Sequences: 237096
Number of extensions: 1858937
Number of successful extensions: 7464
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7460
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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