Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_H01
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 33 0.20
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.35
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 33 0.35
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 33 0.35
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z81111-4|CAB03264.1| 415|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.4
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 30 1.9
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical ... 30 2.5
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 28 10.0
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 10.0
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +2
Query: 563 PTLKTPLR*WKTLTQET--ATNLLTTARTSLILPKT---TTLMETATNLSTTVHITWTLP 727
P + T +R T T T A N+ TT T+ I P T TT++ T T ++TT +P
Sbjct: 17 PVITTTIRPNSTTTTTTSPAPNITTTTTTTTIAPPTNTTTTILTTTTTVTTTTTSPPLIP 76
Query: 728 QG 733
G
Sbjct: 77 DG 78
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 548 LCWLWPTLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 721
LC+LW L T T T T T+ + T T++++ TTT +TTV + T
Sbjct: 179 LCYLWVPLTTTTT--TTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGT 234
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 586 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDN 702
+VE+ D GN P ++ P +N PK + NG +P+DN
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN 80
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 586 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDN 702
+VE+ D GN P ++ P +N PK + NG +P+DN
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN 80
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 586 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDN 702
+VE+ D GN P ++ P +N PK + NG +P+DN
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN 80
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 563 PTLKTPLR*WKTLTQETA--TNLLTTARTSLILPKTTTLMETATNLSTTV 706
PT L T T+ TA T + T ART+ P TTT + + T L TT+
Sbjct: 368 PTTSLALETTTTATRTTAKITAVATVARTNTTQPPTTTPLSSTTALPTTL 417
>Z81111-4|CAB03264.1| 415|Caenorhabditis elegans Hypothetical
protein T01G5.4 protein.
Length = 415
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -1
Query: 133 LSFFLLVFESKRRQNIHYIREIILTRXSKNLKGFPIXE 20
L+FF+LVF S R+ H+ +E+ ++ K LK I E
Sbjct: 217 LAFFVLVFTSINREVSHFNQELEKSKNEKTLKSIGILE 254
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 602 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 727
T T T TT+ T+ P TTT T STT T T P
Sbjct: 61 TTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 596 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPQGRP 739
T T T+T TT T TTT T T +T T T+P P
Sbjct: 86 TPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNP 133
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +2
Query: 596 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPQGRPYFKPTPFP 763
T T T TT T+ TTT T STT T T P T P
Sbjct: 74 TTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +2
Query: 611 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPQGRPYFKPTP 757
T T TT T+ P TTT T T T PQG F TP
Sbjct: 66 TPTTTTTTTTTTTTTPTTTTTTTTTTTPEPTTTKVKVCPQGYTSFLRTP 114
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 602 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT---LPQGRPYFKPT 754
T T T T++ PK TT + T T +TTV T T PQG F+PT
Sbjct: 170 TTTTVRKTTQTTATTMTTPKPTTTVSTTT--TTTVPPTTTPKACPQGFVLFEPT 221
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 590 WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPQGRP 739
WK T TT + + PK TTL +T T +T+ T T +P
Sbjct: 134 WKKFTTTEEPLETTTTKRIITTPKRTTLRKTTTTTTTSTTSTSTTTTEKP 183
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 593 KTLTQETATNLLTTARTSLILPKTTT 670
KT Q T T + TT RTS +P TTT
Sbjct: 288 KTNPQITTTTMTTTTRTSTAIPTTTT 313
>AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical
protein R52.6 protein.
Length = 151
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 596 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPQG 733
TL E T ++TT TS + K M AT + WTL G
Sbjct: 47 TLPYEETTEMMTTMETSTMTEKVCPEMPAATACMDLTTLGWTLELG 92
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +2
Query: 560 WP----TLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTV 706
WP T+ P T T +T +TT T P TTT TA +TT+
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +2
Query: 560 WP----TLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTV 706
WP T+ P T T +T +TT T P TTT TA +TT+
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +2
Query: 596 TLTQETATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTLPQGRPYFKPT 754
T T T TT TS P TTT T T STT T T+ PT
Sbjct: 292 TTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPT 345
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 619 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 705
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,201,627
Number of Sequences: 27780
Number of extensions: 292925
Number of successful extensions: 952
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -