Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_G22
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369...    68   9e-12
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847...    67   2e-11
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    64   1e-10
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468...    52   6e-07
01_06_0441 + 29417004-29417114,29417213-29417311,29417405-294175...    30   2.2  
06_03_0195 + 17780203-17781918                                         29   6.6  
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697...    29   6.6  

>08_01_0417 -
           3692247-3692329,3692442-3692504,3693233-3693350,
           3694084-3694095
          Length = 91

 Score = 68.1 bits (159), Expect = 9e-12
 Identities = 36/84 (42%), Positives = 50/84 (59%)
 Frame = +3

Query: 120 MSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 299
           M LQE F+Q A   K L    ++   L LY  +KQATVGD + A RPG+   + +AK+DA
Sbjct: 1   MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTA-RPGIFAQRDRAKWDA 59

Query: 300 WHKLAGTSKDDAQKAYIEIVEGLI 371
           W  + G SK++A   YI  V+ L+
Sbjct: 60  WKAVEGKSKEEAMSDYITKVKQLL 83


>03_05_0107 -
           20883353-20883627,20883739-20883801,20884608-20884725,
           20885012-20885023
          Length = 155

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 35/83 (42%), Positives = 50/83 (60%)
 Frame = +3

Query: 120 MSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 299
           M LQE F++ A  VK L    ++   L LY  +KQATVGD +  +RPG+   + +AK+DA
Sbjct: 1   MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVN-TSRPGIFAQRDRAKWDA 59

Query: 300 WHKLAGTSKDDAQKAYIEIVEGL 368
           W  + G SK++A   YI  V+ L
Sbjct: 60  WKAVEGKSKEEAMSDYITKVKQL 82


>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 34/84 (40%), Positives = 49/84 (58%)
 Frame = +3

Query: 120 MSLQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDA 299
           M LQE+F++ A   K L    ++   L LY  +KQATVG      RPG+ +LK + K+DA
Sbjct: 1   MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVT-TGRPGIFNLKDRYKWDA 59

Query: 300 WHKLAGTSKDDAQKAYIEIVEGLI 371
           W  + G SK++A   YI  V+ L+
Sbjct: 60  WKAVEGKSKEEAMADYITKVKQLL 83


>04_04_1623 -
           34846056-34846223,34846547-34846644,34846738-34846829,
           34847096-34847202,34847385-34847490,34848108-34848547
          Length = 336

 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 29/73 (39%), Positives = 43/73 (58%)
 Frame = +3

Query: 150 AANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKD 329
           AA+  +  ++P  AQL  LY  +K AT G    A +P  L LK +AK++AWHKL     +
Sbjct: 102 AASAASGTSVPEQAQL-QLYGLYKIATEGPCT-APQPSALKLKARAKWNAWHKLGAMPTE 159

Query: 330 DAQKAYIEIVEGL 368
           +A + YI +V+ L
Sbjct: 160 EAMQKYITVVDEL 172


>01_06_0441 +
           29417004-29417114,29417213-29417311,29417405-29417534,
           29417673-29417765,29417892-29417982,29418166-29418222,
           29419200-29419320,29420183-29420331,29420675-29420891
          Length = 355

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -2

Query: 114 SNVGNLLQRRYTRPEPNTSFRLKILRNSLLVXRYW 10
           +NVG +LQ++ T   P  SF+LK++R +  + R W
Sbjct: 15  NNVGKVLQKKGTHILPPLSFKLKVIR-AYALNRLW 48


>06_03_0195 + 17780203-17781918
          Length = 571

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 227 GLFEMGIQVKELGISWKSFQVLHVGCGLVKFFLE-RHIDQMWVTCYNDDTP 78
           G +E G Q+  L I ++  + L+VGC L   +   +++D   V  Y  + P
Sbjct: 73  GSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAP 123


>02_02_0119 +
           6978697-6979045,6979519-6979581,6979757-6979866,
           6979969-6980154,6980266-6980361,6980493-6980564,
           6980798-6980909,6982448-6982534,6982680-6983872
          Length = 755

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = -2

Query: 177 ELSGS----SRWLRLGQIFLGETY*SNVGNLLQRRYTRPEPNT-SFRLKILRNSL 28
           ELSG+    SR  +L    L E   ++ GNL  R+Y  P+P    F++KI  N +
Sbjct: 215 ELSGTPDQISRAEQLINEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKV 269


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,505,689
Number of Sequences: 37544
Number of extensions: 402004
Number of successful extensions: 787
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)