Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_G18
         (967 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...    35   0.075

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 38/121 (31%), Positives = 45/121 (37%)
 Frame = +2

Query: 185 FLGLXXXXVQRGXXGTXXXRFXKXKATKXVGLXXXMAISXXLLXTXLQRXGXPAXLSLXX 364
           F+ +    V RG  G    RF + +  K V L    A    L          P   SL  
Sbjct: 8   FIAIKPDGVHRGLVGKIIARFEE-RGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSLI- 65

Query: 365 *KXMSSGTCGP*WYWGGALMYVXDWPXIX*XATXPTXSXTGTIRXXLXXQXGRNIIHXSD 544
            + MSSG       W G  + V         AT P  S  GTIR     Q GRNI H SD
Sbjct: 66  -EYMSSGPVVA-MVWQG--LDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSD 121

Query: 545 S 547
           +
Sbjct: 122 A 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,141,876
Number of Sequences: 27780
Number of extensions: 108397
Number of successful extensions: 119
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)