Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_G17
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 38 0.010
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 38 0.010
U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 37 0.017
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 36 0.039
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 36 0.039
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 36 0.039
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z74032-5|CAA98467.1| 219|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr... 34 0.16
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 34 0.16
Z74032-3|CAA98461.1| 220|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 33 0.36
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 33 0.36
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 33 0.36
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 33 0.36
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 33 0.36
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 33 0.36
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 33 0.36
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 31 0.83
AF016687-4|AAC48097.1| 183|Caenorhabditis elegans Hypothetical ... 31 0.83
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 31 1.5
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 31 1.5
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensor... 30 1.9
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 30 1.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 30 1.9
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 30 2.5
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 30 2.5
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 30 2.5
Z75539-3|CAA99845.1| 228|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75531-13|CAA99808.1| 228|Caenorhabditis elegans Hypothetical p... 29 3.4
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 29 4.4
AF039047-6|AAB94226.1| 186|Caenorhabditis elegans Hypothetical ... 29 5.9
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 28 7.8
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 28 7.8
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKCIN 209
GGC GN N F+TL EC KC+N
Sbjct: 897 GGCGGNANNFATLQECTNKCVN 918
Score = 35.1 bits (77), Expect = 0.068
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKCI 212
GGC GN N F+T+ EC +C+
Sbjct: 835 GGCGGNGNNFATMQECRSRCV 855
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 289 KNSFXGGCPGNDNRFSTLAECEQKC 215
K F GGC GN N F + +CE C
Sbjct: 565 KYFFWGGCEGNQNNFERVEDCESAC 589
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI-N*LIIFN*RTLFKSAAP 161
GC GN N F +L +C++ C+ N I N + +AAP
Sbjct: 1820 GCDGNANNFGSLEDCQRLCVLNIQSIKNGKVATTTAAP 1857
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN N F T ECE C
Sbjct: 1114 GGCAGNRNHFFTQKECEVHC 1133
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
G GN N+F TL+ECE+ C
Sbjct: 1319 GLGGNTNQFETLSECERIC 1337
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKCI 212
F GC GN NRF ++CE C+
Sbjct: 2153 FFRGCGGNLNRFERKSDCEALCL 2175
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKCI 212
G C GN+N F CE+KC+
Sbjct: 1254 GSCGGNENNFFDRNTCERKCM 1274
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.010
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKC 215
F GGC GN+NRF +L EC +C
Sbjct: 55 FYGGCEGNENRFDSLEECSSQC 76
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.010
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKC 215
F GGC GN+NRF +L EC +C
Sbjct: 55 FYGGCEGNENRFDSLEECSSQC 76
>U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical
protein T22F7.3 protein.
Length = 988
Score = 37.1 bits (82), Expect = 0.017
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GNDN F+TL C+QKC
Sbjct: 479 GCQGNDNNFNTLMACQQKC 497
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
C37C3.6c protein.
Length = 1487
Score = 35.9 bits (79), Expect = 0.039
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF+T+ EC+ +C
Sbjct: 1464 GGCLGNTNRFATIEECQARC 1483
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF + ECEQ+C
Sbjct: 1302 GGCGGNLNRFRSKDECEQRC 1321
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKCI 212
GGC GNDN F++ CE C+
Sbjct: 1122 GGCGGNDNNFASQDMCETICV 1142
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKCIN 209
GGC G +NRF +C+ C N
Sbjct: 1407 GGCQGTNNRFDNEQQCKAACQN 1428
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 35.9 bits (79), Expect = 0.039
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF+T+ EC+ +C
Sbjct: 1535 GGCLGNTNRFATIEECQARC 1554
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF + ECEQ+C
Sbjct: 1302 GGCGGNLNRFRSKDECEQRC 1321
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKCI 212
GGC GNDN F++ CE C+
Sbjct: 1122 GGCGGNDNNFASQDMCETICV 1142
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN NRF++ +CE C+
Sbjct: 1407 GCGGNANRFASKDQCESLCV 1426
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKCIN 209
GGC G +NRF +C+ C N
Sbjct: 1478 GGCQGTNNRFDNEQQCKAACQN 1499
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 35.9 bits (79), Expect = 0.039
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF+T+ EC+ +C
Sbjct: 1535 GGCLGNTNRFATIEECQARC 1554
Score = 35.1 bits (77), Expect = 0.068
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKCI 212
+ GGC GN NRF T +CE C+
Sbjct: 1650 YYGGCAGNTNRFETRDKCETSCV 1672
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF + ECEQ+C
Sbjct: 1302 GGCGGNLNRFRSKDECEQRC 1321
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF + +C+Q C
Sbjct: 1884 GGCRGNQNRFVSKEQCQQSC 1903
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKCI 212
GGC GNDN F++ CE C+
Sbjct: 1122 GGCGGNDNNFASQDMCETICV 1142
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN N FS+ A+CE C
Sbjct: 1822 GCGGNGNAFSSKADCESLC 1840
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN NRF++ +CE C+
Sbjct: 1407 GCGGNANRFASKDQCESLCV 1426
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF + +C ++C
Sbjct: 1945 GGCEGNANRFDSELDCFRRC 1964
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKCIN 209
GGC G +NRF +C+ C N
Sbjct: 1478 GGCQGTNNRFDNEQQCKAACQN 1499
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 35.9 bits (79), Expect = 0.039
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCIN 209
GC GNDN F TL EC+ C N
Sbjct: 595 GCQGNDNNFETLLECQNTCEN 615
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCIN 209
GC GN N F+TL +C C++
Sbjct: 811 GCSGNLNNFATLEQCNNFCLS 831
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN N F+T +CE C
Sbjct: 704 GCDGNSNNFATREDCEGYC 722
>Z74032-5|CAA98467.1| 219|Caenorhabditis elegans Hypothetical
protein F35B12.6 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.12
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCIN 209
GC GN+NRFST EC C N
Sbjct: 54 GCGGNENRFSTSKECRDACQN 74
>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
protein ZC84.6 protein.
Length = 1474
Score = 33.9 bits (74), Expect = 0.16
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCIN 209
GC GNDN F TL +C+ C N
Sbjct: 471 GCQGNDNNFETLVDCQTFCRN 491
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN N F++ AECE C
Sbjct: 580 GCDGNSNTFASRAECENYC 598
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 33.9 bits (74), Expect = 0.16
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCIN 209
GC GN+NRF++L EC+ C N
Sbjct: 621 GCQGNNNRFNSLNECQSYCKN 641
>Z74032-3|CAA98461.1| 220|Caenorhabditis elegans Hypothetical
protein F35B12.4 protein.
Length = 220
Score = 33.1 bits (72), Expect = 0.27
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCIN 209
GC GN NRFS+ EC C N
Sbjct: 79 GCGGNSNRFSSAQECRSACTN 99
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF T+++CE C
Sbjct: 1163 GCGGNSNRFMTVSQCENLC 1181
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF T C++ C
Sbjct: 1368 GGCGGNPNRFDTFEICQKAC 1387
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF+T CE C
Sbjct: 1307 GCGGNRNRFATQDICENTC 1325
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF T+++CE C
Sbjct: 1377 GCGGNSNRFMTVSQCENLC 1395
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF T C++ C
Sbjct: 1582 GGCGGNPNRFDTFEICQKAC 1601
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF+T CE C
Sbjct: 1521 GCGGNRNRFATQDICENTC 1539
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF T+++CE C
Sbjct: 1513 GCGGNSNRFMTVSQCENLC 1531
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF T C++ C
Sbjct: 1718 GGCGGNPNRFDTFEICQKAC 1737
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 292 VKNSFXGGCPGNDNRFSTLAECEQKCI 212
+ ++ GC GN NRF A C +C+
Sbjct: 26 INHTVSRGCGGNSNRFMRRAHCRNRCV 52
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF+T CE C
Sbjct: 1657 GCGGNRNRFATQDICENTC 1675
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF T+++CE C
Sbjct: 1562 GCGGNSNRFMTVSQCENLC 1580
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN NRF A C +C+
Sbjct: 78 GCGGNSNRFMRRAHCRNRCV 97
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF T+++CE C
Sbjct: 1554 GCGGNSNRFMTVSQCENLC 1572
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF T C++ C
Sbjct: 1759 GGCGGNPNRFDTFEICQKAC 1778
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN NRF A C +C+
Sbjct: 78 GCGGNSNRFMRRAHCRNRCV 97
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF+T CE C
Sbjct: 1698 GCGGNRNRFATQDICENTC 1716
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF T+++CE C
Sbjct: 1565 GCGGNSNRFMTVSQCENLC 1583
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF T C++ C
Sbjct: 1770 GGCGGNPNRFDTFEICQKAC 1789
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN NRF A C +C+
Sbjct: 78 GCGGNSNRFMRRAHCRNRCV 97
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF+T CE C
Sbjct: 1709 GCGGNRNRFATQDICENTC 1727
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF T+++CE C
Sbjct: 1566 GCGGNSNRFMTVSQCENLC 1584
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKC 215
GGC GN NRF T C++ C
Sbjct: 1771 GGCGGNPNRFDTFEICQKAC 1790
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN NRF A C +C+
Sbjct: 78 GCGGNSNRFMRRAHCRNRCV 97
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRF+T CE C
Sbjct: 1710 GCGGNRNRFATQDICENTC 1728
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
protein ZC84.1 protein.
Length = 1556
Score = 31.5 bits (68), Expect = 0.83
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCIN 209
GC GNDN F ++ +C+ C N
Sbjct: 558 GCQGNDNNFDSIMDCQNFCKN 578
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 274 GGCPGNDNRFSTLAECEQKCIN 209
GGC GN N F + +C C++
Sbjct: 771 GGCDGNANNFLNIQQCRNFCMS 792
>AF016687-4|AAC48097.1| 183|Caenorhabditis elegans Hypothetical
protein T21D12.12 protein.
Length = 183
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKCIN 209
F GC GN NRF + CE C N
Sbjct: 55 FYQGCDGNSNRFQSKEACESACRN 78
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 392 PTTD-LPICEQAFGDAGXCFGYMKLYXYXQETKNCEEF 282
P+TD L IC+ + C G+ ++ Y +ET C+EF
Sbjct: 157 PSTDPLAICKMGVPNGRFC-GFRPMFTYNRETLQCDEF 193
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 392 PTTD-LPICEQAFGDAGXCFGYMKLYXYXQETKNCEEF 282
P+TD L IC+ + C G+ ++ Y +ET C+EF
Sbjct: 155 PSTDPLAICKMGVPNGRFC-GFRPMFTYNRETLQCDEF 191
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN N+F T EC+Q C+
Sbjct: 654 GCKGNRNQFETEEECKQICL 673
>AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform j protein.
Length = 255
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN NRF A C +C+
Sbjct: 78 GCGGNSNRFMRRAHCRNRCV 97
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN NRF A C +C+
Sbjct: 78 GCGGNSNRFMRRAHCRNRCV 97
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN NRF A C +C+
Sbjct: 78 GCGGNSNRFMRRAHCRNRCV 97
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 289 KNSFXGGCPGNDNRFSTLAECEQKC 215
K GGC G NRFS+ +C ++C
Sbjct: 62 KEFHYGGCMGTKNRFSSKQQCVKQC 86
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKC 215
F GC GNDN+F +L C + C
Sbjct: 132 FYYGCGGNDNKFYSLHMCRKVC 153
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 289 KNSFXGGCPGNDNRFSTLAECEQKC 215
K GGC G NRFS+ +C ++C
Sbjct: 62 KEFHYGGCMGTKNRFSSKQQCVKQC 86
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKC 215
F GC GNDN+F +L C + C
Sbjct: 132 FYYGCGGNDNKFYSLHMCRKVC 153
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 289 KNSFXGGCPGNDNRFSTLAECEQKC 215
K GGC G NRFS+ +C ++C
Sbjct: 62 KEFHYGGCMGTKNRFSSKQQCVKQC 86
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKC 215
F GC GNDN+F +L C + C
Sbjct: 132 FYYGCGGNDNKFYSLHMCRKVC 153
>Z75539-3|CAA99845.1| 228|Caenorhabditis elegans Hypothetical
protein C54D10.10 protein.
Length = 228
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKCI 212
F GC GN+NRF + C C+
Sbjct: 65 FYRGCGGNENRFESRDACSDACV 87
>Z75531-13|CAA99808.1| 228|Caenorhabditis elegans Hypothetical
protein C54D10.10 protein.
Length = 228
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKCI 212
F GC GN+NRF + C C+
Sbjct: 65 FYRGCGGNENRFESRDACSDACV 87
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 29.5 bits (63), Expect = 3.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCIN 209
GC GN N F T+ +C+ C++
Sbjct: 398 GCSGNGNNFETVDQCQNFCLH 418
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 268 CPGNDNRFSTLAECEQKCIN 209
C GN N F +L ECE C++
Sbjct: 292 CGGNANNFGSLEECEGFCVD 311
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC G NRF+T C + C+
Sbjct: 501 GCGGTPNRFTTKVACTESCV 520
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GNDN F T +C + C
Sbjct: 542 GCNGNDNNFVTRVDCIETC 560
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN N F T EC+ C
Sbjct: 443 GCQGNANNFETYKECQDYC 461
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN N F+T +C+ C
Sbjct: 552 GCDGNSNNFATQQDCKDYC 570
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKC 215
GC GN NRFS+ EC C
Sbjct: 59 GCGGNQNRFSSRQECINGC 77
>AF039047-6|AAB94226.1| 186|Caenorhabditis elegans Hypothetical
protein K11D12.6 protein.
Length = 186
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
GC GN+N F+ C Q+CI
Sbjct: 54 GCGGNENNFADPRICRQRCI 73
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 289 KNSFXGGCPGNDNRFSTLAECEQKC 215
K+ G GN N F T +CE KC
Sbjct: 487 KSFAYNGAKGNQNNFLTKQQCESKC 511
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 280 FXGGCPGNDNRFSTLAECEQKCI 212
F G GNDNRF +CE+ C+
Sbjct: 295 FYSGRDGNDNRFYKKNKCERLCL 317
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
G GN+N F + ECEQ C+
Sbjct: 402 GLQGNENNFLSQNECEQSCL 421
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 271 GCPGNDNRFSTLAECEQKCI 212
G GN+N F + ECEQ C+
Sbjct: 402 GLQGNENNFLSQNECEQSCL 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,848,052
Number of Sequences: 27780
Number of extensions: 286681
Number of successful extensions: 693
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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